FMO10995.5prime Sequence
1062 bp (914 high quality bases) assembled on 2011-11-18
> FMO10995.5prime
CAGTCGACATGAGCAGTCCCAGGGATAAGGCGGAGCAGGTGTACGAGGTG
AAGGCTCCACATGCCGGTGCAGAGGGTCACACGTTCCTTGTGAGTCCCGT
GGACCCCACTCCGATCCTAGCGCCCATTCTCACCGCTGTGCCTGTGATGA
AAGCACCGGATTCGCCTGCTTCAATGGACAAGACCAAGGAGATGGAGGAG
CTGGATGATGAGCAGCCGAGCTGCAGTTCCCAGGCGGTGGTGCCGTTGTC
CTCATCGCTGCCCTGCAAGCTGCTCCGCATGCATGCCAGACGCTCGGCCC
AGGCGCTGCTCCACCAAATGGAATCGATGGACTCTCAGCTGGGCAGCAGC
AATGGCAGCACCTCGGAGGATACTTCACCCTCTGCTCCGCCCATGTCGCC
CACTGACCACCAACTGGTGGATGTGGGCATGGGTTCCTCCATTGGGGACT
CGGATGAATCGTCGGAAGAGGGTGATGAGCTGAAGCCCCTGGCCGTGGAC
AATCACATCATAGCCGAGGTGGACCTAACCGAGCGCCAGACTACGCCACC
GGCCGTCTTGAGTGAGGCGAATTTGGAGAAGTTCCGTAAGCACCAGATGG
ATAACATCTATCTACATCCTAACTTCACTCTGGATGCTTCTCCACCTCCG
GCGGTCGCACCAGCCAACTCACCCGTTCTGGAGGCCAAGAGAACCCATCG
TTCGTTCCTCACCATGAAGAAGGAAAAGGAGGTGGAGCCGCCGCAAGAGA
AGAGCAGGAAGTGCCGGTACACCAGGAACAGGATACTGAGCCCCAAGACC
CAATGAGATAGAACACTAGATCCCTCACTCATTCCCAGCGAGGAACTGGC
AGCGAAATCACGATGCCGTGGAGTTCTACTTCTCCCATGAGAGCATCCTG
AAGGATGCATTCCTGCTTGAACCATGTGCGACGCAACCAGGAGGGTTGTC
AGCCTTAAACTGGTGTTCAGCTTTCAAAAAGGATGCGCCAACTTGACAAG
GGATTGAAGTGGTTGGAAAATGCATGCGTCCCAGTCCCCCCAGATCAACG
ATGATGTGCACC
FMO10995.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:53:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17386-RB | 4441 | CG17386-RB | 715..1759 | 8..1046 | 4680 | 97.3 | Plus |
| CG17386-RA | 4271 | CG17386-RA | 715..1759 | 8..1046 | 4680 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:53:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14421038..14422009 | 8..973 | 4440 | 98.8 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:53:05 has no hits.
FMO10995.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:59 Download gff for
FMO10995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17386-RA | 698..1690 | 8..997 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:04:38 Download gff for
FMO10995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17386-RA | 715..1707 | 8..997 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:32:50 Download gff for
FMO10995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17386-RA | 715..1707 | 8..997 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:32:50 Download gff for
FMO10995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14421038..14422009 | 8..973 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:04:38 Download gff for
FMO10995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10308543..10309514 | 8..973 | 98 | == | Plus |
