FMO11005.5prime Sequence
1145 bp (1064 high quality bases) assembled on 2011-11-18
> FMO11005.5prime
CAGTCGACATGGCTGAAATCAGGCTAGTTGTGGTTCTACTGGTCCTTATG
ACCACCTGTATCTATACACTTCAAGCCAGTGACAGTAATTCCTCCGTGGC
AACCACCTTGGGCGTTTTGTTCGAGAGGGCTCCCGAATCAGCGGTGGCCC
CGAAAGGAGATGAGGTGGTATTCGAGTGCGAGCTGAATCTGAAACCTGAT
CGCCTGGAGTGGCGGTTTAGACGTGGTGATTCCTCGGAGCCCTATCTATA
CCTAAGGCCCTCGGCTGGCTATAACGTGACCAGCGGAAGCGATGGTCTTG
CCTGGAGACTGCGCATCTATGTGAGTGCCCAAACGGCTGGGGACTACCAG
TGTGTGGCTTGGTATGGCCCGGGTGCACTGGCTTCCACGCCAGCCCGCTT
GGCCTTGGTCTCGATTGCTTTGGACGTCGGCCAGGGATCCATGGGGGCCA
GGAGCTCCATCCGCTGGAGCGTGGCGCCCAAAAACTGCCTGCTCATTCGT
TGCGGCAGCGTAATATCGAATCCGCCGGCTATTTGGAGCTTCTACAGAAA
CGGAAAGAAGCTACCTCAATCGGAGCTGCTGCCTGGCGCTGCGGGGGCAT
TGGTTTTGGATACGGTCACCGCCAAAGATGCGGGTAACTACTCGTGCGTG
GCCACGAACTCCATAACAGGCGATGAACTTAGGCTCCCCCAAACTATTGA
ACTAAGAGTGGACTACACAGATAGGACACCTCCGTACTTTCTACAACGTC
CACCCATCGAATACTCAGCTCGTCCCGGAGAAACAGTGGTGCTCGAGTGT
CCTGGCGTGGATCCCCACGACCCCGAGTCATTTGGAGTAGTCCCAATGTG
GTTGAGATCTATAATAATAGAAGCACCATCCTGTCCTACGGCCTGCAAAT
CACCGATGTGAAGCCCGAGGATCAAGGTTCCTATATCTGCATGCTGGACA
ATGGTATTGCACCACCGATCGATCACACCATCAGTTGAGTGTTTTGCAGC
GGCCCACGATCTTAGAGGACGGCCGCCACTCTGACGAATGAAAGCAATTC
ATTGCTGCTGGAATGCTCCGCCTCGGGCATCCCAAACGAATTTTATTGAC
TATTAAACGTGAGGATGCCCAAGATCGAGGGCTGGTGATACCGGA
FMO11005.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:53:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
boi-RG | 4544 | CG32796-RG | 343..1461 | 9..1119 | 5210 | 98.1 | Plus |
boi-RF | 4509 | CG32796-RF | 629..1747 | 9..1119 | 5210 | 98.1 | Plus |
boi-RE | 4316 | CG32796-RE | 436..1554 | 9..1119 | 5210 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:53:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 2451057..2452129 | 1077..9 | 5075 | 99.1 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:53:56 has no hits.
FMO11005.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 10:00:03 Download gff for
FMO11005.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
boi-RE | 389..1479 | 1..1087 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:05:02 Download gff for
FMO11005.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
boi-RE | 429..1519 | 1..1087 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:33:09 Download gff for
FMO11005.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
boi-RE | 429..1519 | 1..1087 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:33:09 Download gff for
FMO11005.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 2451046..2452133 | 1..1087 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:05:02 Download gff for
FMO11005.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 2345079..2346166 | 1..1087 | 98 | | Minus |