FMO11007.5prime Sequence
916 bp (902 high quality bases) assembled on 2011-11-18
> FMO11007.5prime
CAGTCGACATGTCTTCCGGCCTGATGTCGTGTGTAAGGGAAAACTCGCCG
CCGCTGGAATCGGAGTTGGATGCCAGCTGCGCCGGGGGACCATTGTCATT
GCCGGCGGGCCGCGCCCACCCGCACACCCACGGCGCCACCTCAACGCCCA
TCTCCAGTCCAGGAAACGATGCCCATCAGTCCCCGACCGCCGAGCATCCA
AATCAGCAGCAGCAACAGCAGCAGCAGAAGCGTCGTCGTTTCCATCCGCT
TCGTAACCTGCGTCGCATCTTCCGGCGACGTACGATTAATAGCTCCACGG
ACAGTCCAGCATCCTGTCAGTCGCCAGGACCCGGATCCTGCAACACCTTG
CCACCGCCCGCCAGCAGCAGCAGTGAGAAGAATCTGCGCAGCGGGATCGC
CTCGCCAACAGGATCTCCCCTGAATCCCCAGCAGCTGAAGGAGAACTACC
AGACGCAATCGCTGCCCAAGTCCAAATCGTACGGTTCGCATCGCGATGAG
CTGCTAAGTGTGCTTCTGGGCAAAAAACGGGCCAGCAAGCAGGACCACAG
CCAGGTTGCAGTCCAACCCGATTCCCAAGCGCAGTCGCAATCGCCGCAGG
AAGCCATGTACCAGGCCCAGCGACAGCATGGCGGCGTGGCCGTCTTCCCG
GATTCACTAGTCCTTAACCGGAGCAGCTACTTTGCCGAGCAGAGAATCCA
ACAGCGCCATCTACGCAGCGTGGGTGACTCCTCGCAGGAACTGGAGTCCA
ACCTATGCTTGGGATCACGATCAGGATCAGGATCCGGAGCTGGTGGCGCC
GCTGACATCTCCGACAGCCAGCGTAGCCCTCAGCGAAGGTCGACTCCTGG
ATGTGGACGGGGATTACCTCTCGGGATACCCTGTCCCAGTCACATGACAG
CGTTCTTCTCTGAATC
FMO11007.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:54:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30015-RF | 5363 | CG30015-RF | 172..1078 | 7..916 | 4445 | 99.5 | Plus |
CG30015-RE | 5965 | CG30015-RE | 631..1536 | 8..916 | 4440 | 99.4 | Plus |
CG30015-RC | 6386 | CG30015-RC | 1052..1957 | 8..916 | 4440 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:54:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10848593..10849261 | 861..192 | 3270 | 99.6 | Minus |
2R | 25286936 | 2R | 10856124..10856308 | 192..8 | 925 | 100 | Minus |
2R | 25286936 | 2R | 10848487..10848534 | 916..868 | 195 | 98 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:54:12 has no hits.
FMO11007.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 10:00:04 Download gff for
FMO11007.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30015-RC | 979..1891 | 1..916 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:05:10 Download gff for
FMO11007.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30015-RF | 168..1078 | 1..916 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:33:14 Download gff for
FMO11007.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30015-RF | 168..1078 | 1..916 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:33:14 Download gff for
FMO11007.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10848487..10848540 | 861..916 | 96 | <- | Minus |
2R | 10848594..10849260 | 193..860 | 99 | <- | Minus |
2R | 10856124..10856311 | 1..192 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:05:10 Download gff for
FMO11007.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6735992..6736045 | 861..916 | 96 | <- | Minus |
arm_2R | 6736099..6736765 | 193..860 | 99 | <- | Minus |
arm_2R | 6743629..6743816 | 1..192 | 97 | | Minus |