FMO11017.5prime Sequence
1115 bp (1027 high quality bases) assembled on 2011-11-18
> FMO11017.5prime
CAGTCGACATGCTCAAAGCCGCAAAGATCCCCTTGTTCTTCGCCCTTTTG
GGTGCTGTGTGTATCCAGGCCGTCGTGGTTGGTCCCCAGCCATTGCATAA
TAACAACAGGAACGGCTACCGCTACAATGGCCCCGCCCACAAGTATCTCC
CATCGGAGGAGTCGCACTCGCACGGCAGCCCCTTGGATTCGAGTCACCAG
CATGATCAGCAGGGCCCCAGTAATGCCTACAACTCACATCATTACCCAGC
ACAGGAGCAACATGGCCAGGGAGCGCCGGAGCACGACCATCAGCAGAAGG
AGGTTGACTCCTGGCAAACGGCTCTTTCCCAGCAGCAACACGAGAGCTTC
GGAAACCAGCAAAATCATCAGAACGCCTACAATGAAGGACCTGTGTACCA
GCACTATCAGGGATTTAACCACCAACAACATTATGGATTAAGCCAACAGC
AACAGCATGAAAGCTACGGGCAGGAACACTATCAACAGAGCCCCAACCAG
CTGCAACACCATCAGTCCCAACACGCAAACGAATATGCCTACGAACCAGC
TCATTTCCAGCAGCAACAGCAGCATCACGAAATTCAGGGTCACAAGCAGC
ATCAGCAGAGGAAAGAGCACTGGAACTTCGTTCAAGAGCAGCAACCCCAA
AATCACGAACCCTGGCAATCTTCGCATGGCTTCCAACAGCACCAGCAGCA
GCATTCCAATCGCTTTGAGTCACAGCTTCCGCTGCGGGAAGACCTTTGGC
AACCCATTCGTGAGCTGGACCTAGAGAAGCTTCCTTCGGCTGAGGCGCAC
GCCAGTAGCCACAAGACAGTTGCAGCTCCTGGACGAGATGTAAAGCTCGT
GCCCAGTTACACGCTCTCCAGCGACTTTGAGCACGACCGCTTCATCGGAC
TGGATAGTACGGACACTCGTCTGCTGACCCAATCTCTGCCAGATGCCTAC
CGGAAACAGCTGTCTCTCGCCACAGAACCATCGTCTTTAGCCCAGGGACA
TAACAGCAACACAGCCCGGATCCGCAGCTATGTGTCCCACGACCATCCTT
GGCGATCCCATCCGATTTCTTGCAATGCAGTCCCACTCGGATTAGCTGCG
TCAACGGTTTAATCA
FMO11017.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:55:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11381-RA | 1603 | CG11381-RA | 86..1190 | 9..1099 | 5140 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:55:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 1203932..1204940 | 25..1028 | 4800 | 99.3 | Plus |
Blast to na_te.dros performed 2014-11-27 20:55:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6715..6920 | 437..645 | 234 | 62.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..7002 | 418..703 | 212 | 59.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6723..6964 | 475..721 | 212 | 58.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2325..2464 | 558..703 | 202 | 63.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6719..6861 | 555..703 | 199 | 63.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2331..2544 | 444..654 | 198 | 61.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6918 | 496..703 | 198 | 60 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2308..2514 | 496..702 | 196 | 58.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2616 | 483..783 | 193 | 57.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2356..2687 | 418..734 | 193 | 56.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2372..2510 | 470..608 | 190 | 62.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6767..7012 | 330..581 | 182 | 58.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6756..7013 | 397..660 | 181 | 58.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2608 | 507..813 | 180 | 54.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6735..6944 | 397..603 | 179 | 56.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2473 | 449..619 | 172 | 59 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6726..6951 | 355..577 | 168 | 57.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2647..2945 | 418..710 | 167 | 56.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6758..6897 | 558..703 | 167 | 60.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6646..6880 | 475..704 | 165 | 56.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2440 | 563..703 | 142 | 58.2 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1006..1150 | 445..581 | 139 | 60.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1373..1600 | 402..620 | 136 | 55 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1059..1161 | 545..655 | 130 | 64.3 | Plus |
FMO11017.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 10:00:10 Download gff for
FMO11017.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11381-RA | 76..1200 | 1..1111 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:05:55 Download gff for
FMO11017.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11381-RA | 78..1202 | 1..1111 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:33:48 Download gff for
FMO11017.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11381-RA | 78..1202 | 1..1111 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:33:48 Download gff for
FMO11017.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 1203934..1205032 | 27..1111 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:05:55 Download gff for
FMO11017.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 1097967..1099065 | 27..1111 | 98 | | Plus |