Clone FMO11020 Report

Search the DGRC for FMO11020

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:110
Well:20
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG34331-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11020.5prime Sequence

359 bp (359 high quality bases) assembled on 2011-11-18

> FMO11020.5prime
CAGTCGACATGAGCGCAATAAAGCCCGCCCTGCTGCTCTGCCTGATCCTC
ACCATCGGTCTGTTCCTTGGTCAAGGTCGGGCGAATCCCGTGGAGACGAA
TGTTCCCGATATTCCCGCACCCGATGCCAACGAACTGGGCATCGATTTCG
GAGAGGAGGAAGATGCCACCGACAAGCCACTGGGCATATTCACGATCAAG
GTGCGCCACATTCATCCGGACCCCGCCCACTGCGCCCAGCTCTCGCCACA
TCACCCACACCACCCCCAGTGCCACAGCTACTGCAAACGCCAAGGTCACT
GGGTGGGCCAGTGCAAGAAGGACATCTGTCAGTGCTTTTCCGCAAGCTTT
CTAGACCAT

FMO11020.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:56:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG34331-RB 609 CG34331-RB 28..364 5..341 1655 99.4 Plus
CG34331-RC 599 CG34331-RC 28..223 5..200 965 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:56:01
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 20122480..20122816 5..341 1655 99.4 Plus
Blast to na_te.dros performed on 2014-11-27 20:56:02 has no hits.

FMO11020.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 10:00:12 Download gff for FMO11020.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34331-RB 21..360 1..341 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:06:07 Download gff for FMO11020.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34331-RB 25..364 1..341 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:33:58 Download gff for FMO11020.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34331-RB 25..364 1..341 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:33:58 Download gff for FMO11020.5prime
Subject Subject Range Query Range Percent Splice Strand
X 20122477..20122816 1..341 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:06:07 Download gff for FMO11020.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 20016510..20016849 1..341 98   Plus