Clone FMO11026 Report

Search the DGRC for FMO11026

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:110
Well:26
Vector:pMK33-CFH-BD
Associated Gene/TranscriptmRpS34-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11026.5prime Sequence

590 bp (590 high quality bases) assembled on 2011-11-18

> FMO11026.5prime
CAGTCGACATGGCCCAAAAAGTGATCAAGTACATCGGTCGCACCACAGAC
TTTCGCGGCAACACGCTGTGGGAGCTGGTCTCAAACCTGCCCAACTGGGG
TGTGGGCCGTCTGCTAATACGTAACATGTTCCAGCGATATCCGGAGCCCT
GCTACATGCGGATTCTGAAGGTGCAGTCCGTGGACGAGCAGCCCGGCGAG
ATCCGCAAGGTGCGGGTCACTGTGGAGAAAACGTGGCGCGGCGTAACGCA
GCCAAAGCCTGTGGAAATCTACAGCACCAGCTATAAGGCGGACTACGAAC
TGGTGCCGCAGGATCAGGAAGCAAAGTATCTGAACAACAAGAAGAAGGTT
GAACCAGTGATACTGCCCACCAAGATTGAACTTCCGCCTCTGCTCCGCGA
ACTGGTATCGGAGGAAACGGGCAACCCCAATCCCCAGATGAAGGTCCACT
ACAAACTGACCGACAACAAAATGGCCAGATTAGCCAAGGATGGAGAAAAG
CCAACTGTTAACTTTGCCCTTGGTGTGGGCCAGCCGAAACCCGTGAGCGC
CAAGCTTTACGAAGGATTATTAGCAAGCTTTCTAGACCAT

FMO11026.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:56:45
Subject Length Description Subject Range Query Range Score Percent Strand
mRpS34-RA 709 CG13037-RA 94..657 9..572 2820 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:56:43
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16348167..16348730 9..572 2820 100 Plus
Blast to na_te.dros performed on 2014-11-27 20:56:44 has no hits.

FMO11026.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 10:00:16 Download gff for FMO11026.5prime
Subject Subject Range Query Range Percent Splice Strand
mRpS34-RA 64..639 1..578 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:06:34 Download gff for FMO11026.5prime
Subject Subject Range Query Range Percent Splice Strand
mRpS34-RA 87..662 1..578 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:34:21 Download gff for FMO11026.5prime
Subject Subject Range Query Range Percent Splice Strand
mRpS34-RA 87..662 1..578 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:34:21 Download gff for FMO11026.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 16348160..16348735 1..578 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:06:34 Download gff for FMO11026.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16341260..16341835 1..578 99   Plus