FMO11028.5prime Sequence
410 bp (410 high quality bases) assembled on 2011-11-18
> FMO11028.5prime
CAGTCGACATGCATCCGGAACGCTACGCCAGTCCAAATCCATTGATACCA
TTGGTAATCGCAGGCGCCCTGCTCTTCTCGATGCTCTCGCAGGTGAGCGG
CTACTCGGGACGAATTCCACCGGATGCAGATAATCCCGGGAAGTGCATGT
ACCGCGGTGACGTCCTGGAACTGGGTGTCAACAATGGCATCGCTCCCTGC
CAGCGACTGACTTGCAACAAGGATGGATCAATACTTATCGAGGGTTGCGG
CAAACTGCGCATCGAAAACTGCAACCGAGGCGAGCGAATCTCTCCGGGTG
AACCCTTTCCGGAATGCTGCAAGCTGAGATACAAGTGCAAGCAAATCGGA
GCGGCACCCTACTACATCGAGCGGAATACGGCGGAGAAGGTCGCAAGCTT
TCTAGACCAT
FMO11028.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:56:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15203-RB | 900 | CG15203-RB | 61..444 | 9..392 | 1920 | 100 | Plus |
| CG15203-RA | 610 | CG15203-RA | 53..436 | 9..392 | 1920 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:56:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11067775..11067923 | 244..392 | 745 | 100 | Plus |
| X | 23542271 | X | 11066612..11066732 | 9..129 | 605 | 100 | Plus |
| X | 23542271 | X | 11066813..11066930 | 127..244 | 590 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:56:58 has no hits.
FMO11028.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 10:00:17 Download gff for
FMO11028.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15203-RA | 25..416 | 1..392 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:06:41 Download gff for
FMO11028.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15203-RA | 45..436 | 1..392 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:34:28 Download gff for
FMO11028.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15203-RA | 45..436 | 1..392 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:34:28 Download gff for
FMO11028.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11066604..11066732 | 1..129 | 97 | -> | Plus |
| X | 11066816..11066930 | 130..244 | 100 | -> | Plus |
| X | 11067776..11067923 | 245..392 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:06:41 Download gff for
FMO11028.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10960637..10960765 | 1..129 | 97 | -> | Plus |
| arm_X | 10960849..10960963 | 130..244 | 100 | -> | Plus |
| arm_X | 10961809..10961956 | 245..392 | 100 | | Plus |
