Clone FMO11029 Report

Search the DGRC for FMO11029

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:110
Well:29
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG6770-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11029.5prime Sequence

233 bp (233 high quality bases) assembled on 2011-11-18

> FMO11029.5prime
CAGTCGACATGTCCGAGGCCCACTTCGATGAGTACGAGCACTACAACTTC
GACCATGACAAGCACATCTTCTCTGGACACAGCGGCAAGCAGCGCAACAA
GAGGGAGGCCAATGAGCACACCAACCACTTCGATCCCTCCGGTCATTCCC
GCAAGATTCTGACCAAGCTGATGAACACCAACAACAACAACAAGAAAGCC
GCCGCCTGCAAGAACGCAAGCTTTCTAGACCAT

FMO11029.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:57:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG6770-RA 776 CG6770-RA 144..350 9..215 1035 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:57:05
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12045769..12045975 215..9 1035 100 Minus
Blast to na_te.dros performed 2014-11-27 20:57:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2386..2436 174..221 103 72.5 Plus

FMO11029.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 10:00:18 Download gff for FMO11029.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6770-RA 126..338 9..221 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:06:45 Download gff for FMO11029.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6770-RA 144..356 9..221 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:34:32 Download gff for FMO11029.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6770-RA 144..356 9..221 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:34:32 Download gff for FMO11029.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 12045763..12045975 9..221 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:06:45 Download gff for FMO11029.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 12045763..12045975 9..221 98   Minus