Clone FMO11034 Report

Search the DGRC for FMO11034

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:110
Well:34
Vector:pMK33-CFH-BD
Associated Gene/Transcripthoip-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11034.5prime Sequence

407 bp (407 high quality bases) assembled on 2011-11-18

> FMO11034.5prime
CAGTCGACATGACTGAGGAAGTTAATCCCAAGGCATTCCCGCTGGCCGAT
GCCCAGCTTACCGCCAAGATCATGAACTTGCTGCAGCAAGCATTGAACTA
CAATCAACTGCGCAAGGGAGCCAACGAGGCCACCAAGACCCTCAATCGCG
GACTGGCCGATATTGTGGTGCTGGCCGGTGATGCGGAGCCCATCGAGATT
CTGCTCCATTTGCCGCTCCTGTGCGAGGACAAGAACGTGCCCTACGTCTT
CGTTCGTTCCAAGCAGGCCTTGGGGCGTGCGTGCGGAGTTTCCCGGCCAA
TAGTCGCCTGCTCTGTGACCACCAACGAGGGCAGCCAGCTCAAGTCGCAG
ATCACCTCCATTCAGCAGGAGATCGAGCGACTGCTAGTCGCAAGCTTTCT
AGACCAT

FMO11034.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:56:18
Subject Length Description Subject Range Query Range Score Percent Strand
hoip-RB 607 CG3949-RB 145..525 9..389 1905 100 Plus
hoip-RA 569 CG3949-RA 107..487 9..389 1905 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:56:15
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9699999..9700377 11..389 1895 100 Plus
Blast to na_te.dros performed on 2014-11-27 20:56:16 has no hits.

FMO11034.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 10:00:13 Download gff for FMO11034.5prime
Subject Subject Range Query Range Percent Splice Strand
hoip-RA 136..525 1..389 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:06:14 Download gff for FMO11034.5prime
Subject Subject Range Query Range Percent Splice Strand
hoip-RA 98..487 1..389 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:34:05 Download gff for FMO11034.5prime
Subject Subject Range Query Range Percent Splice Strand
hoip-RA 98..487 1..389 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:34:05 Download gff for FMO11034.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 9699992..9700377 1..389 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:06:14 Download gff for FMO11034.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9699992..9700377 1..389 98   Plus