FMO11036.5prime Sequence
1173 bp (1069 high quality bases) assembled on 2011-11-18
> FMO11036.5prime
CAGTCGACATGTACAAGAACATCGACAATGAGTCCTCCACGACCATGTTT
GAAATGTACTCCTCCTCGGATAGGTTCATACGTTCGGACATGGCCGACGT
ACCCGTGCAGCAGGCGGCAGGATCGACGCTTCCGTTGGTAATCTCTCGGA
AAAAAGGCGACGACTCCGAGGATGGCAACTACAATCCGTTCGAGCACCGC
AAGGTGGAGCATCCGACATCGGATCTCGAGACATTTGTACACTTGCTAAA
GGGATCGCTTGGCTCCGGAATATTGGCCATGCCAATGGCCTTCTCCCACG
CTGGATTGTGGTTCGGTTTGGTGGCCACCTTCGCGGTGGGCACCTTGTGC
ACCTACTGCGTCCACATTCTGGTCAAGTGCGCCCACATCCTGTGCCGACG
TCGTAAAATCCCGATGATGGGATTCGCCGATGTGGCGGAACAGGCTTTCC
TCGACGGACCACCTGCCCTGAATCGCTGGTCACGCTTCATCCGGTTCATG
GTCAATACGTTTCTGGTTATCGATTTGCTGGGCTGCTGCTGCATCTATCT
GGTTTTCGTGGCCACCAATGTGGAGCAGGTCGTGCGGGTGTATATGGAAA
CGGAGCTGAGCATTAGAGTTTGGATCATGATCGTGACGGCACCGCTAATC
TTTATGTGCCTGGTACGCACCTGAAGTTCCTCACGCCCTTCTCGATGATA
GCCAACATCCTGATGTTCGTGGGCATCGTGATCACCTTCATCTATATGTT
CTCCGATATTCCTGCACCCGTGGAACGTCCTGAATTGTGAGTGTAACCGA
ATGGCCATTGTTCTTCGGCACCGTGATCTTTGCTCTGGAGGGCATCGGTG
TAGTTATGTCCCTGGAGAACGACATGAAGAACCCCAGCCACTTCATCGGT
TGCCCATCTGTCCTGAACTTCGGCATGGGTCTGGTGATTGCCCTCTACAC
TCTGGTTGGATTCTTTGGCTTCCTGAAGTACGGCCCGGGAAACCCAAGGC
AGCATTACGCTGATCTGCCCCTGGAGGATAAGTTGGCCCAATCGTCAAGT
GATGATTGCATCGCATTCTTCTCACTTTCACCTGCAGTTCTACGTGCCGT
CCGAATTTTGTGGAGTCTTGTAACCAAGATCCGCCGGAAAGCGAAACTCC
AGATCGAACTCGTTCTTACTAGG
FMO11036.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:56:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43693-RC | 2163 | CG43693-RC | 92..1205 | 9..1114 | 5205 | 98.5 | Plus |
CG43693-RG | 2434 | CG43693-RG | 428..1476 | 74..1114 | 4880 | 98.4 | Plus |
CG43693-RB | 2399 | CG43693-RB | 393..1441 | 74..1114 | 4880 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:56:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 11037620..11038434 | 1033..221 | 3850 | 99.3 | Minus |
3L | 28110227 | 3L | 11039617..11039829 | 221..9 | 1065 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:56:31 has no hits.
FMO11036.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 10:00:14 Download gff for
FMO11036.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6327-RC | 84..1205 | 1..1114 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:06:24 Download gff for
FMO11036.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43693-RC | 84..1205 | 1..1114 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:34:13 Download gff for
FMO11036.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43693-RC | 84..1205 | 1..1114 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:34:13 Download gff for
FMO11036.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 11039618..11039833 | 1..220 | 98 | | Minus |
3L | 11037622..11038434 | 221..1031 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:06:24 Download gff for
FMO11036.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 11032718..11032933 | 1..220 | 98 | | Minus |
arm_3L | 11030722..11031534 | 221..1031 | 99 | <- | Minus |