FMO11041.5prime Sequence
934 bp (934 high quality bases) assembled on 2011-11-18
> FMO11041.5prime
CAGTCGACATGAACAGTGCCGTACCGCCCGGCGTGTTGGGACTACCCTAT
CGATTTTCGGATGAGCGTACGGTCAAGTTCGTAGAGCTTTACGGCCGGGA
ACCTTGTCTCTGGAACAAGCGACCATATTTGCGACGAGCTCGAAGCGCCG
CCTATCGGCGAATTCAGTCCGGGATCAATGCTGATATTGAACCATATGAG
TCAGGTCTTACCATCCAGGGCGTAAAGATGAAGATCAAGAATCTTCGTAC
TGGGTACCACCAGGAGCTAAAGAAGATCCGAACTATTCCGGGATATCAGC
CAAAGACGCCCTGGTTTGCCCCACTTCACGGGTTTTTGGCAGAGTTCTTG
GACACGAATGAGTTGGAAACATCAATTCCTCAACTAAAGCGCCTACAGAT
TCGACTTACCAGACTGAAGCCGATTAAGATTCAGACGGAGATTAAGCCAG
ATCCCGATGACTTGTCAGTCCCCGATAGGCCGTTGGATGCTACACCCTCT
TCCTTATTTACCGTTCTGCCAGCACCTATGCCCGTGGAGGAGCCTCCCAC
TCCACCGCCTTCCGTGCCCAAGATCGGAGACATCATCTCACCAGTACATC
CAGACCCAGCGCCTGTTCCGATAGCAGGGAACTGTCCTCTGTCGACAGCC
TGCTCCATTTCTGAAAAAAAGTGAGGTCTTGGGATTGGGCCTGGGAGTAT
CGGCAGCTGGACGGACGAATGGAGTTGGCCTTGGAGTTGAAATGCGAGGC
GAGGACGAATTCACCTACTTCGGGTTGAGCGTTGCAGCGCAAATCCGTAA
TATGCCATTGGCCAGTGCCATGCTAATGCAGTCGAAAATCCAGTATATGC
TCTCTAATGGAGCGTCGTAAGATTAACGGTCATCCTGGCGATATGGACAT
ATTTTCTAACTAAAAAGCAAGCTTTCTAGACCAT
FMO11041.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:58:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30403-RB | 1268 | CG30403-RB | 145..1050 | 8..916 | 4470 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:58:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21710113..21710670 | 916..356 | 2655 | 99.5 | Minus |
| 2R | 25286936 | 2R | 21711121..21711469 | 356..8 | 1745 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:58:52 has no hits.
FMO11041.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 10:00:25 Download gff for
FMO11041.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30403-RB | 135..1056 | 1..927 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:07:34 Download gff for
FMO11041.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30403-RB | 139..1060 | 1..927 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:35:10 Download gff for
FMO11041.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30403-RB | 139..1060 | 1..927 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:35:10 Download gff for
FMO11041.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21710103..21710669 | 357..927 | 98 | <- | Minus |
| 2R | 21711121..21711473 | 1..356 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:07:34 Download gff for
FMO11041.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17597608..17598174 | 357..927 | 98 | <- | Minus |
| arm_2R | 17598626..17598978 | 1..356 | 98 | | Minus |
