Clone FMO11043 Report

Search the DGRC for FMO11043

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:110
Well:43
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG12607-RC
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11043.5prime Sequence

470 bp (470 high quality bases) assembled on 2011-11-18

> FMO11043.5prime
CAGTCGACATGAAATTCTTTTTGCTATTGGCTTTGGCCCTTGTGGGCATT
GCTGCTGGAGCTCAGCTTCCTGACTCCGCCACCCAGGGACCCAATCCTCA
GGATATTGCCACCCCGGAGCCGGAGTACATTGATATCGACGAACCTGCAC
CGGTGGCTGCCGCACCTGCTCCTCGTCCTGTGGCCGCTGCTCCCCGTCCC
GTCTTCGCCGCCCCTGCTCCCATCGCTCGGCCAGTTGCTCATCCAGTGGC
TCGCCCCGTGGTTGTGGCCCAATCCTTCGTCCAGCAGCCCGTCCAGCAGC
AGATTGTCCAGAGGGCTCAGTACGTGGCGCCGGTGGCTCAGCAGGTGGTG
TTGCCGCAACAGCAGCTGGTGGGACACACCTACAACAGCAGGGCTGGATA
CCAGTACCGCCGTCCAGTCTATGTAAGACGTTTCTATCGCCTGCGCCGCT
ACGCAAGCTTTCTAGACCAT

FMO11043.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:59:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG12607-RC 1001 CG12607-RC 103..546 9..452 2220 100 Plus
CG12607-RD 794 CG12607-RD 103..516 9..422 2070 100 Plus
CG12607-RB 691 CG12607-RB 103..516 9..422 2070 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:59:03
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4447176..4447617 11..452 2210 100 Plus
Blast to na_te.dros performed on 2014-11-27 20:59:04 has no hits.

FMO11043.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 10:00:27 Download gff for FMO11043.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12607-RC 101..548 9..457 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:07:40 Download gff for FMO11043.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12607-RC 103..550 9..457 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:35:15 Download gff for FMO11043.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12607-RC 103..550 9..457 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:35:15 Download gff for FMO11043.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 4447174..4447621 8..457 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:07:40 Download gff for FMO11043.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4447174..4447621 8..457 99   Plus