FMO11045.5prime Sequence
739 bp (739 high quality bases) assembled on 2011-11-18
> FMO11045.5prime
CAGTCGACATGGCCCTGTCCAAGATCGACACCGAGATCGAGCAGGTTGAC
CAGGAGAAGTACCTGCGTCAGGCCACTAGCTACTATCAGCCGCTGGAGAA
ACCCCTGAAATACGGACCGGAGGTGAATTCCCTATCGGACTTGGTGGCCG
CCCTTCACCGGGAATTCGAGTCGAACTATGTTAACATCGAGATGGTGAAT
CACCTTATGCTCAGCTACAAGTCCAATCCGCGGGAGTGGCGCAAATATGC
CAAGTTCGATCGTTACACCTACACGCGGAATCTCGTGGATGCTGGCAATG
GAAAGTTCAATCTGCTGATTCTGTGCTGGGGCGAAGGACACGGCTCCTCG
GTGCACGACCATGCCGATTCCCATTGCTTCATGAAGATGCTGAAGGGTGA
TCTGCGCGAGAAGCGCTACGAGTATCCCAATAGATCTGCCAGGGACAACG
GCCGGTCCCATCATCCCGATGGCGAGATCGATAGCCGAGAGCTGGTGGAG
ATTGGGGAGACACCAATCGCCGTCAATGATGTGGCCTACATAAATGACAA
TCTGGGTCTGCATCGCGTGGAGAACCCCAGCCATTCGGATACCTCTGTCT
CCCTTCACCTATACTGTCCACCCTTCGACACGTGCTCCGTGTTCCAGGAC
AACCTGAAGAAGACCACCGCCAAGGTCACCTTCTGGAGCAAATACGGCGT
GAGGACGAAGCAGAACGAGCAGCAAGCTTTCTAGACCAT
FMO11045.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:59:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5493-RD | 1031 | CG5493-RD | 63..776 | 9..722 | 3570 | 100 | Plus |
CG5493-RC | 1130 | CG5493-RC | 162..875 | 9..722 | 3570 | 100 | Plus |
CG5493-RB | 1161 | CG5493-RB | 193..906 | 9..722 | 3570 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:59:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18617200..18617737 | 546..9 | 2690 | 100 | Minus |
2R | 25286936 | 2R | 18616947..18617123 | 722..546 | 885 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:59:19 has no hits.
FMO11045.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 10:00:28 Download gff for
FMO11045.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5493-RA | 203..916 | 9..722 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:07:47 Download gff for
FMO11045.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5493-RB | 193..906 | 9..722 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:35:21 Download gff for
FMO11045.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5493-RB | 193..906 | 9..722 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:35:21 Download gff for
FMO11045.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18616947..18617122 | 547..722 | 100 | <- | Minus |
2R | 18617200..18617737 | 9..546 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:07:47 Download gff for
FMO11045.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14504452..14504627 | 547..722 | 100 | <- | Minus |
arm_2R | 14504705..14505242 | 9..546 | 100 | | Minus |