FMO11047.5prime Sequence
344 bp (344 high quality bases) assembled on 2011-11-18
> FMO11047.5prime
CAGTCGACATGGTGTACCAGGTGAAAGATAAGGCCGATCTCGATGGACAG
CTGACCAAGGCATCCGGCAAGCTGGTGGTGCTGGATTTCTTCGCCACTTG
GTGCGGACCCTGCAAGATGATCTCGCCCAAACTGGTTGAGCTTTCCACGC
ATTTCGCCGACAACGTCGTCGTCCTGAAGGTCGATGTGGACGAATGCGAA
GACATTGCAATGGAATACAACATCTCCAGCATGCCCACCTTCGTGTTCCT
CAAGAACGGCGTCAAGGTCGAAGAGTTCGCCGGAGCCAACGCCAAGCGTC
TGGAGGATGTCATCTAGGCCAATATCGCAAGCTTTCTAGACCAT
FMO11047.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:57:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Trx-2-RA | 790 | CG31884-RA | 102..421 | 7..326 | 1570 | 99.4 | Plus |
| Trx-2-RB | 1338 | CG31884-RB | 293..612 | 7..326 | 1570 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:57:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9615300..9615450 | 31..181 | 740 | 99.3 | Plus |
| 2L | 23513712 | 2L | 9615530..9615678 | 178..326 | 730 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:57:56 has no hits.
FMO11047.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 10:00:21 Download gff for
FMO11047.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Trx-2-RB | 288..617 | 1..331 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:07:09 Download gff for
FMO11047.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Trx-2-RB | 287..616 | 1..331 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:34:50 Download gff for
FMO11047.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Trx-2-RB | 287..616 | 1..331 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:34:50 Download gff for
FMO11047.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9615302..9615448 | 33..179 | 99 | -> | Plus |
| 2L | 9615532..9615682 | 180..331 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:07:09 Download gff for
FMO11047.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9615302..9615448 | 33..179 | 99 | -> | Plus |
| arm_2L | 9615532..9615682 | 180..331 | 98 | | Plus |
