FMO11054.5prime Sequence
497 bp (497 high quality bases) assembled on 2011-11-18
> FMO11054.5prime
CAGTCGACATGTCGTTTGCGGAAAAGATAACGGGTCTGCTGGCACGGCCG
AATCAACAAGATCCAATTGGACCGGAGCAGCCGTGGTATCTCAAATATGG
AAGTCGATTGCTGGGCATTGTGGCCGCCTTCTTTGCCATTCTTTTCGGCC
TGTGGAATGTGTTCTCCATCATCACGCTCAGCGTATCCTGCCTGGTGGCT
GGCATCCTTCAAATGGTGGCAGGATTTGTGGTGATGCTCTTGGAGGCTCC
CTGCTGTTTCGTCTGCTTTGGGCAGGTGAACGAGATCGCGGAAAAGGTGG
AATCTAAGCCCTTGTACTTCCGTGCCGGGCTCTACATTGCCATGGCCATT
CCGCCCATTATTCTGTGCTTTGGACTGGCCAGCTTATTCGGCAGTGGGCT
GATCTTTGGCACTGGCGTGGTTTACGGCATGATGGCGTTAGGCAAGAACA
AGCATATATTTTTAGTGAGAAACTATATTGCAAGCTTTCTAGACCAT
FMO11054.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:55:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fwe-RC | 2364 | CG6151-RC | 134..605 | 8..479 | 2360 | 100 | Plus |
| fwe-RA | 1342 | CG6151-RA | 134..574 | 8..448 | 2205 | 100 | Plus |
| fwe-RB | 3020 | CG6151-RB | 134..574 | 8..448 | 2205 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:55:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15813419..15813626 | 340..133 | 1040 | 100 | Minus |
| 3L | 28110227 | 3L | 15815936..15816057 | 132..11 | 610 | 100 | Minus |
| 3L | 28110227 | 3L | 15813246..15813353 | 448..341 | 540 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:55:42 has no hits.
FMO11054.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 10:00:34 Download gff for
FMO11054.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| flower-RC | 132..618 | 1..486 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:06:33 Download gff for
FMO11054.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fwe-RC | 127..613 | 1..486 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:54:49 Download gff for
FMO11054.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fwe-RC | 127..613 | 1..486 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:54:49 Download gff for
FMO11054.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15813419..15813626 | 133..340 | 100 | <- | Minus |
| 3L | 15815936..15816059 | 8..132 | 99 | | Minus |
| 3L | 15812203..15812241 | 449..486 | 94 | <- | Minus |
| 3L | 15813246..15813353 | 341..448 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:06:33 Download gff for
FMO11054.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15805303..15805341 | 449..486 | 94 | <- | Minus |
| arm_3L | 15806346..15806453 | 341..448 | 100 | <- | Minus |
| arm_3L | 15806519..15806726 | 133..340 | 100 | <- | Minus |
| arm_3L | 15809036..15809159 | 8..132 | 99 | | Minus |
