FMO11055.5prime Sequence
761 bp (761 high quality bases) assembled on 2011-11-18
> FMO11055.5prime
CAGTCGACATGGTCAGTGCCCGAGTCCTGAATCCTGTGATGATCAGTGAG
TTCTGCAAGATGAGCAGCAGCCCGGCGGTGAGTCGCAATCTGGCATGCGG
TCGTCAGTTGAATCGCATAAAGCGTGACCTCTTCGGTAGCTCCAAATCCG
CCGAGGGTACAGCCAACAAAACACCCTTTAATTCCGAACTGGAGCGCCAT
CAAGAACTGGCCACGCAAAAATGGGGCTTTGACTTCCGCGCCGGCTGCCC
TTTAGCTGAAAAATCACCCTACATTTGGGAGCGCGTCAGCTTCCAGGAGT
CGAGCTTCGCCCCAGAGATGTACACCCTAACACGGGCCGCCCACGTACGC
CCTTCCGCGGATGCAAGTCCTAGCGACATGGACATTTTGGTCAACGAGCG
CTCAGAACGGGAGAACTTTGGCTCCAATCTGGTCAATTCCTCGCTAGAGT
CGAACACGGATAATGAATCTTGTTACGACTCCCAGGACGAGTCGCTGGCA
ATGCGGCTTAGCTCCTCCAGCACGACAAGCACATCCTCCATAGTCCTGCG
CAAGAGACAGCCAAAAATCACAGAATTCATGAAGGAGCGCAAACGTCTGG
CCCAGGCACCCAAGAAACTATCGCCCGCAAAGCGCATGCGCACCAGTTCT
CCCAGTTCGTCCGCCACTTCCAGCTCCAGCTCCAGCGGTGGATTTGGGTT
GGGGGCACACTTTGGGGCGATGTTGAAGCGGCCGCGCCACAACGCAAGCT
TTCTAGACCAT
FMO11055.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:55:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
dap-RA | 2530 | CG1772-RA | 618..1354 | 7..743 | 3685 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:55:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9713163..9713563 | 173..573 | 2005 | 100 | Plus |
2R | 25286936 | 2R | 9714907..9715080 | 570..743 | 870 | 100 | Plus |
2R | 25286936 | 2R | 9712938..9713103 | 7..172 | 830 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:55:55 has no hits.
FMO11055.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 10:00:34 Download gff for
FMO11055.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
dap-RA | 610..1359 | 1..750 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:06:40 Download gff for
FMO11055.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
dap-RA | 612..1361 | 1..750 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:54:54 Download gff for
FMO11055.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
dap-RA | 612..1361 | 1..750 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:54:54 Download gff for
FMO11055.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9714911..9715087 | 574..750 | 98 | | Plus |
2R | 9712932..9713103 | 1..172 | 98 | -> | Plus |
2R | 9713163..9713563 | 173..573 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:06:40 Download gff for
FMO11055.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 5600437..5600608 | 1..172 | 98 | -> | Plus |
arm_2R | 5600668..5601068 | 173..573 | 100 | -> | Plus |
arm_2R | 5602416..5602592 | 574..750 | 98 | | Plus |