FMO11060.5prime Sequence
773 bp (773 high quality bases) assembled on 2011-11-18
> FMO11060.5prime
CAGTCGACATGTTGCCCCACGATAGGAAAATACTTAGGCAACATACACGC
CAGAACCAGAATACGAATCGCCGGCGCCCCAGATTCACCAACAATAGCTT
CCATACCAAAATGGGCAGCAACTCCAAGGCAGACCCCATCTCGCTGACCT
TCCACGACTCCTGCCTGCGGATGTCCGACGTCCAGTTGCTCCACGGCCCG
CACTGGCTGAACGACCAGATCCTGAGCTTCTACTACGAATACCTGGCCCA
CATGAAGTACAAGACCAATGCGGATCTGCACTTCATTGCGCCGGAGATTA
CGCAGTGTATGAAGTACATGGGCGACCAGGAGCTGAAGCAGCTTCTCGAC
CAGAGCAACACCACTGGCAAGCCCTTTATCTTCTTCGCGCTGAACGACAA
CGAAACCACCGATGCTGGTGGCAGCCACTGGTCACTGTTGGTCTTCTCGC
GTCCGGAGAAGACCTTCTATCACTTCGATTCGTATGGGAACAACAACACG
GGCAACTCCCTGGAGCTGATGAACAAGATCAAGGACCTGCTTGGCGTCCG
AATGGCCAAATTCCGGCCCATGCGCTGCCTACAGCAGGCGAACGGCTACG
ACTGTGGCATCCATGTTATCTGCATGACCGACCACATTGCCGATTACCTA
AACAGATACGAGGTGATCGACGGACTGCCGTCGCTGCACATCGACACCGT
GAAGGCGAAGCGCACCGAGCTACTGAAACTCATCCTGTCGCTGGGCGGCA
AGGGCGCAAGCTTTCTAGACCAT
FMO11060.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:59:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Den1-RC | 1161 | CG8493-RC | 121..867 | 9..755 | 3735 | 100 | Plus |
| Den1-RA | 1257 | CG8493-RA | 245..963 | 37..755 | 3595 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:59:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12338531..12339250 | 36..755 | 3600 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:59:44 has no hits.
FMO11060.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 10:00:30 Download gff for
FMO11060.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Den1-RC | 113..867 | 1..755 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:08:01 Download gff for
FMO11060.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Den1-RC | 113..867 | 1..755 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:35:31 Download gff for
FMO11060.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Den1-RC | 113..867 | 1..755 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:35:31 Download gff for
FMO11060.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12338533..12339250 | 38..755 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:08:01 Download gff for
FMO11060.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8226038..8226755 | 38..755 | 100 | | Plus |
