Clone FMO11061 Report

Search the DGRC for FMO11061

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:110
Well:61
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG42615-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11061.5prime Sequence

227 bp (227 high quality bases) assembled on 2011-11-18

> FMO11061.5prime
CAGTCGACATGGACCACAAGAAAACGTTAACCTGGTTTTTCAGCCTGTCA
TCGGTGCGCTACGCGCAGATCTTTATCGTAATGGCGGTCGATCTGCTGAC
CCTGTCCAATCTGTATCCCAAGCACTCGAGCTACATTGCGCGTCCATTCC
TACTCTGGCAGGATCTTCAGGAGGAGGACGAACGTAGCTTGGACTCACCC
CAGCAATTCGCAAGCTTTCTAGACCAT

FMO11061.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:56:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG42615-RB 421 CG42615-RB 58..258 9..209 1005 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:56:42
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8737427..8737627 9..209 1005 100 Plus
Blast to na_te.dros performed on 2014-11-26 23:56:44 has no hits.

FMO11061.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 10:00:38 Download gff for FMO11061.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42615-RB 58..263 9..216 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:07:05 Download gff for FMO11061.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42615-RB 58..263 9..216 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:55:16 Download gff for FMO11061.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42615-RB 58..263 9..216 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:55:16 Download gff for FMO11061.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 8737427..8737626 9..208 100 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:07:05 Download gff for FMO11061.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4624932..4625131 9..208 100 <- Plus