FMO11062.5prime Sequence
197 bp (197 high quality bases) assembled on 2011-11-18
> FMO11062.5prime
CAGTCGACATGTGGCTTCTCTGGTTTATTCTCCACCTAATTGGCCTCATC
CAAGGGCGTTCTGTGGGCGGTGGGTCTGTAAACTTGGATGACGAGTTTTT
CATGCCTCAGCCAGATCCCACAATATTTGCCTACAATCAAACTGATAAGG
GATCATCACCCTGGGACAATACCTGGAACGCAAGCTTTCTAGACCAT
FMO11062.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:56:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43109-RA | 261 | CG43109-RA | 15..185 | 9..179 | 855 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:56:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18868067..18868153 | 95..9 | 435 | 100 | Minus |
2R | 25286936 | 2R | 18867924..18868009 | 179..94 | 430 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:56:53 has no hits.
FMO11062.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 10:00:39 Download gff for
FMO11062.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43109-RA | 8..194 | 1..187 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:07:10 Download gff for
FMO11062.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43109-RA | 8..194 | 1..187 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:55:20 Download gff for
FMO11062.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43109-RA | 8..194 | 1..187 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:55:20 Download gff for
FMO11062.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18867921..18868007 | 96..180 | 97 | <- | Minus |
2R | 18868067..18868160 | 1..95 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:07:10 Download gff for
FMO11062.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14755426..14755512 | 96..180 | 97 | <- | Minus |
arm_2R | 14755572..14755665 | 1..95 | 96 | | Minus |