Clone FMO11062 Report

Search the DGRC for FMO11062

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:110
Well:62
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG43109-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11062.5prime Sequence

197 bp (197 high quality bases) assembled on 2011-11-18

> FMO11062.5prime
CAGTCGACATGTGGCTTCTCTGGTTTATTCTCCACCTAATTGGCCTCATC
CAAGGGCGTTCTGTGGGCGGTGGGTCTGTAAACTTGGATGACGAGTTTTT
CATGCCTCAGCCAGATCCCACAATATTTGCCTACAATCAAACTGATAAGG
GATCATCACCCTGGGACAATACCTGGAACGCAAGCTTTCTAGACCAT

FMO11062.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:56:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG43109-RA 261 CG43109-RA 15..185 9..179 855 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:56:52
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18868067..18868153 95..9 435 100 Minus
2R 25286936 2R 18867924..18868009 179..94 430 100 Minus
Blast to na_te.dros performed on 2014-11-26 23:56:53 has no hits.

FMO11062.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 10:00:39 Download gff for FMO11062.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43109-RA 8..194 1..187 96   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:07:10 Download gff for FMO11062.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43109-RA 8..194 1..187 96   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:55:20 Download gff for FMO11062.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43109-RA 8..194 1..187 96   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:55:20 Download gff for FMO11062.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 18867921..18868007 96..180 97 <- Minus
2R 18868067..18868160 1..95 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:07:10 Download gff for FMO11062.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14755426..14755512 96..180 97 <- Minus
arm_2R 14755572..14755665 1..95 96   Minus