Clone FMO11063 Report

Search the DGRC for FMO11063

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:110
Well:63
Vector:pMK33-CFH-BD
Associated Gene/Transcriptgalectin-RE
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11063.5prime Sequence

1116 bp (1017 high quality bases) assembled on 2011-11-18

> FMO11063.5prime
CAGTCGACATGGATGCCTTGGACGGTACGACAATGGAACTGCACAACAGT
TTTCTACAGGTGGAGAGCACAACACACTTTCCTTTGGATTGCATCAGCGA
CATCGAGGTGGTGGATGGAAATGAATTAAAAGCCTCATTTTACGAATATG
CAGATGCTGTGCCAAAATATTTTAACGACCAAATAGGGAAATTGAGCGAA
GGGATAAGTTTCACGGTGACTGGGAATCTCTCTGTAAACTGCGAGAGGTT
TTCCATCAATCTGGTTTATAACAATGACTCTCGAGATGTGGCGCTCCACA
TTAATCCACGGTTGCCACAAAACTATATTGTCCGCAACACCAAAGTACAG
GACATTTGGGGAAACGAGGAAGTGTCCTCGGCATTGCCGTTTCTACTAAG
TCGAGGCGAGGAGTTTTCCATTCAAGTGCTAGTTACTGAGGCATGCTATA
TGATATCGGTAAACGGACAACACTTTGCAGCGTACACTCATCGAATCCCT
TATAGGGATGTTCGCATTCTGGAAGTGAAGGGAGATGTAAGTAACGTGGA
AATGAAGCGAACTTTGGTCTTAAAATATCCTGAGCGATTACCCCAGTCAG
AGGCTAATAACATTGAGCTTCACATAGATGATGGGATTAATGAAATTGAT
GCCAGCGTTGAGGAGACTGTTAAAATACCTCATGAGTGGTGCATTATTAG
CGCCCCGAACACACAGTCGGACAGTTCGCCTAAGCGTAACAATAGTTCGA
ATGATCTTGGCCTTACTTTGCCTTATTATGGAGCATTGCCACCAAATTCG
TTGGTCGATGGTCGATGCTTGAAGATTGAAGGAGAGTGCGATTACTTCCC
CACTCGTTTTATATAAACCTGCAACAGGGGCAGGACATATGGGCACATCC
AGTAATTGCATTCCACTTAAACCCACGTTTTCGAAAGCAGCAGCGGCGCT
ATTGAAAGGCGTGGTGTGTAGATGCCTGGCTTAATGGAGCTGGCACCAGA
GAGCGTTCGGGAGTTTGACACACTTTCGCCTGTCGTCTTTTTGTTTAGCA
TGTTGTACAAAATCTTTGGAGGGTATGTCCATCCGCCAGTTATGACTGAA
TTATATAGGTAGCTGA

FMO11063.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:57:03
Subject Length Description Subject Range Query Range Score Percent Strand
galectin-RE 1458 CG11372-RE 86..1197 9..1099 4895 97.2 Plus
galectin-RA 1841 CG11372-RA 469..1580 9..1099 4685 96 Plus
galectin-RF 1536 CG11372-RF 287..1275 132..1099 4280 96.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:57:00
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 75076..75828 246..991 3435 98.9 Plus
2L 23513712 2L 73570..73693 9..132 620 100 Plus
2L 23513712 2L 74903..75020 132..249 590 100 Plus
2L 23513712 2L 72855..72978 9..132 410 88.7 Plus
Blast to na_te.dros performed on 2014-11-26 23:57:01 has no hits.

FMO11063.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 10:00:39 Download gff for FMO11063.5prime
Subject Subject Range Query Range Percent Splice Strand
galectin-RE 86..1156 9..1062 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:07:13 Download gff for FMO11063.5prime
Subject Subject Range Query Range Percent Splice Strand
galectin-RE 86..1156 9..1062 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:55:23 Download gff for FMO11063.5prime
Subject Subject Range Query Range Percent Splice Strand
galectin-RE 86..1156 9..1062 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:55:23 Download gff for FMO11063.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 73570..73692 9..131 100 -> Plus
2L 74903..75018 132..247 100 -> Plus
2L 75078..75909 248..1062 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:07:13 Download gff for FMO11063.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 73570..73692 9..131 100 -> Plus
arm_2L 74903..75018 132..247 100 -> Plus
arm_2L 75078..75909 248..1062 97   Plus