FMO11065.5prime Sequence
182 bp (182 high quality bases) assembled on 2011-11-18
> FMO11065.5prime
CAGTCGACATGGATGCACTTCTGAAAATTGTCTTGTTGATCAGCTTGTAT
TTCATTGCAATAAGCCTGCACTTGGGATTGTGTGACGATGTTCCTTCCGC
CGAGGCAGACACAGTGGTAACTGAAAGTGAAGAGCACTACACCGCATCCG
ATGACTTCGACTATGCAAGCTTTCTAGACCAT
FMO11065.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:57:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42656-RA | 255 | CG42656-RA | 29..191 | 2..164 | 800 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:57:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 7493025..7493149 | 164..40 | 625 | 100 | Minus |
| 3R | 32079331 | 3R | 7493202..7493243 | 43..2 | 195 | 97.6 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:57:20 has no hits.
FMO11065.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 10:00:41 Download gff for
FMO11065.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42656-RA | 27..191 | 1..164 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:07:23 Download gff for
FMO11065.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42656-RA | 27..191 | 1..164 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:55:31 Download gff for
FMO11065.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42656-RA | 27..191 | 1..164 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:55:31 Download gff for
FMO11065.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 7493025..7493145 | 44..164 | 100 | <- | Minus |
| 3R | 7493202..7493243 | 1..43 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:07:23 Download gff for
FMO11065.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 3318747..3318867 | 44..164 | 100 | <- | Minus |
| arm_3R | 3318924..3318965 | 1..43 | 95 | | Minus |
