FMO11066.5prime Sequence
791 bp (791 high quality bases) assembled on 2011-11-18
> FMO11066.5prime
CAATCGACATGGACAATAAGAAGGATATATACAATCTGTGGGTGCAGTAC
ACGACAAAGAATGATGAAACCCACTTCCGGCAATTTGTGGCCCGCTTCGT
GGCCATTTGGAGGAGCCAACTGCAGCTAGACTTTCAGGCGGAAAATTGCC
CGATGTGGCACGAGGTTCAGCCGGATAGTGGTCCCCACTTGGGCCGCCTC
CCGGATGAACTCCTGCCCGCCATCGGTAAATTCATCATTGTAGCCAGAGA
TGTTTGCGAAACGGAAGGGAAACTGGAGGAGCAGGCCATTGAAGAAGTAG
CCATACTCGTGGATTGTCTGGTGATCGTGTGCCGGCACTTTGATAACATA
CTGTCCATCATCAAGTATGAATACAAGCCGAATTTGATCGCCATACTCTC
CAGGGTGTTCAAACAACAAATGGAGCTGCCGCAGAGCGTGCCCGCAATAA
GCCACCTGTTTAGCAGTTTCTCGGCATTCCTGGAAGTCATGTATGATCCA
TATCTGACGTGGCGCAGCTTCGTGCGAGGCCAGTCAGCTGACTACAGTCG
TCTTTCATATAAACCCCACTCGGTTCATGTGGAAATTGTCCCCTTTATTT
ATGATTGCTTTCAGGAGGAGAAGCTCATCCGATATGCGGAAATTGGCGAA
AGCCTGCTAAACATCCTGGGCGCTGTGATTTGCGGCTCACAGGTAGCGCC
AGAAAGCGTCTCCAGTCACTTCCTGTGTAGTCCTTTCTCTCTTAAAAACC
GTTTAATTATTAACCTCACTTCCGCAAGCTTTCTAGACCAT
FMO11066.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:57:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43367-RE | 10170 | CG43367-RE | 293..1057 | 9..773 | 3810 | 99.9 | Plus |
CG43367-RF | 9817 | CG43367-RF | 1..704 | 70..773 | 3505 | 99.9 | Plus |
CG43367-RD | 9842 | CG43367-RD | 293..976 | 9..692 | 3420 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:57:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4194555..4194914 | 57..416 | 1800 | 100 | Plus |
3L | 28110227 | 3L | 4194978..4195164 | 417..603 | 935 | 100 | Plus |
3L | 28110227 | 3L | 4195298..4195468 | 603..773 | 840 | 99.4 | Plus |
3L | 28110227 | 3L | 4194285..4194335 | 9..59 | 255 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:57:29 has no hits.
FMO11066.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 10:00:42 Download gff for
FMO11066.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1308-RE | 283..1066 | 1..781 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:07:27 Download gff for
FMO11066.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43367-RE | 283..1066 | 1..781 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:55:35 Download gff for
FMO11066.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43367-RE | 283..1066 | 1..781 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:55:35 Download gff for
FMO11066.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4194275..4194335 | 1..59 | 93 | -> | Plus |
3L | 4194558..4194914 | 60..416 | 100 | -> | Plus |
3L | 4194978..4195164 | 417..603 | 100 | -> | Plus |
3L | 4195299..4195477 | 604..781 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:07:27 Download gff for
FMO11066.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4194275..4194335 | 1..59 | 93 | -> | Plus |
arm_3L | 4194558..4194914 | 60..416 | 100 | -> | Plus |
arm_3L | 4194978..4195164 | 417..603 | 100 | -> | Plus |
arm_3L | 4195299..4195477 | 604..781 | 97 | | Plus |