FMO11069.5prime Sequence
1058 bp (1036 high quality bases) assembled on 2011-11-18
> FMO11069.5prime
CAGTCGACATGGCGGAAAGCGCTTATACCGATGCGCCGTACCTCAACCGC
GTACCGACAGTTGGTGTGATGTGCATCGATATCGCCACGCAACTGCAGCA
GAACTTTAGTGGTGCATATCACAGCTATTTGGCTGCATCCTATGTCAAAT
TTTTGGAGGCATCCGGTGCGCATGTGGTTCCCATTTGGATCGGCCGAGAA
CGAGCTTACTATGCGTTGATGATGAGCCAGTTAAATGGCATTCTTCTGCC
AGGTGGAGCCGTGTTCATCGACGAGGCTGATAGGCAAGCCAATCCGGATG
TGACCAGCGATTGCGTCCGGAGTGCCGAGCTCATCTACCAATTGGCTATG
GAGCGTAATATGCGGGCGAAGAAGTTGGATGATCGTGGCGCATACTTTCC
CGTTTGGGGAACTTGTCTTGGCTTCCAGTTGATCCTTATTCACGCTGCCG
AAGCACCGAATGTTCGAATCGCCTGTCAGCCCATGAGGGAGGCGATGCCA
GTTACTCTGACCGATGACTATCAACAATCACAACTGCTTGGAAGTCTGCC
GAAATCGGTTGCCGATGAGATGGAGAAGCACCCATTTGCCTGCCATCAGC
ATCGGTATTGCATCACTAAAGAGAGTTTGGAATCCTATGGTCTAGCTAAG
GATTGGCATCCCCTGGCCACTCAGAAGGACACTTCAGGACTGGAATTCAT
CACGATTGTCGAGCACAGGCGTTTTCCCATCTTTGGATGTCAGTTTCATC
CTGAGCGCGCTGCATTTGAGCAGCTTTTCAACTCACCGGACAAATGTTAC
ATGGCGCATTCTCGCATGGGTATCGATTTGTCCCAAATCTTTGGCAGTCG
GTTTGTTGACTTCTGCCGCCGCAACAACAATCAGTTCGAAAGTGACAAAT
AAAAACCAGACATCTCATTTGGAACTGGCAGCCCGTTTTCTCTGCAAGTT
CAAAGGCTCCAACTGCAGCAGTGCTATCTATTTGAGAAGAACGTGGACTA
TCGGAGGAGCCCGATGATTCTGAAGAGCTTCGCCTCATCTGCAGCCTTTC
TAGAACAT
FMO11069.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:57:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(3)72Dr-RA | 1138 | CG32154-RA | 36..1070 | 9..1040 | 4995 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:57:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16238538..16239388 | 187..1033 | 3995 | 99.1 | Plus |
| 3L | 28110227 | 3L | 16237758..16237937 | 9..188 | 900 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:57:58 has no hits.
FMO11069.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 10:00:44 Download gff for
FMO11069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32154-RA | 1..1038 | 9..1043 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:07:41 Download gff for
FMO11069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(3)72Dr-RA | 27..1078 | 1..1048 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:55:46 Download gff for
FMO11069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(3)72Dr-RA | 27..1078 | 1..1048 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:55:46 Download gff for
FMO11069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16237749..16237936 | 1..187 | 97 | -> | Plus |
| 3L | 16238539..16239402 | 188..1048 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:07:41 Download gff for
FMO11069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16230849..16231036 | 1..187 | 97 | -> | Plus |
| arm_3L | 16231639..16232502 | 188..1048 | 98 | | Plus |
