Clone FMO11073 Report

Search the DGRC for FMO11073

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:110
Well:73
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG41106-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11073.5prime Sequence

395 bp (395 high quality bases) assembled on 2011-11-18

> FMO11073.5prime
CAGTCGACATGGAGGACACAGATCAGGAAGACCTGCTGGCTTTCGAGCGT
CGGCTGGCTGAGGTGGTAAACACTGAGAAACGGAGTTCACTCCGCTGGCG
CTTTGTTCTGGGCGCCATCTTCGCCTGCTCGGCGATCAGTGCCTGTCATT
GGGTTCGGGATGCCAAGGAAAGCGAGTCGGTGGTTTTCCAAATCCTGTCC
AGTCAAAGCGCCTTTGCCTTCTCCCTGGCAACCATATGCCTGCTAATCTT
TTATGGATTCAATCACGCCACTAAGCAGGACCCCAGTATCCTGCGTGACA
CCCAAGAAATGCTGTCTCCGTTCCGCCTTAACATTGATAACCAGGGACGT
CTCATCCTACTTCCACGGCAGACAGAGGCAAGCTTTCTAGACCAT

FMO11073.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:58:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG41106-RA 957 CG41106-RA 165..533 9..377 1845 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:58:01
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 22945485..22945853 9..377 1845 100 Plus
Blast to na_te.dros performed on 2014-11-26 23:58:03 has no hits.

FMO11073.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 10:00:44 Download gff for FMO11073.5prime
Subject Subject Range Query Range Percent Splice Strand
CG41106-RA 158..538 1..384 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:07:44 Download gff for FMO11073.5prime
Subject Subject Range Query Range Percent Splice Strand
CG41106-RA 158..538 1..384 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:55:48 Download gff for FMO11073.5prime
Subject Subject Range Query Range Percent Splice Strand
CG41106-RA 158..538 1..384 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:55:48 Download gff for FMO11073.5prime
Subject Subject Range Query Range Percent Splice Strand
X 22945478..22945858 1..384 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:07:44 Download gff for FMO11073.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 22347314..22347694 1..384 98   Plus