FMO11075.5prime Sequence
878 bp (878 high quality bases) assembled on 2011-11-18
> FMO11075.5prime
CAGTCGACATGGCCACAAGCGCGAACTCTGTTCAAGTTTCTGGAGCCGGT
GCGGAGGTAAACGAAGCTAAACTCATCTGCATCTGGGAGGGAATAACTGA
GCTGATCCTGTGGCGCAACTGGATAAAGTCGATGCTTGTATTCGTAATGC
TACAGACCATAATTTATGATCTGCTTTCTGAACCGCTTGTGTTCGTGGTG
AGCGTATGGGCTTTGATTATCATGGTCATATCAATGGGGTACCGTTTTTT
GGTACAGTACACTAATACCCATATCCAGAACAACAGCTATCCGAAATATC
TTGACATAGACCTAAGAATCTCCCAGGAGTTATCTAAGCAACTGGGTGTT
CTAGTTTCAACCAAAGTTGTTGCGTTTCTAAATAATCTACGAGAGATATT
ACTAGTAAAGAGCTTTTCGAAATCATTCAAGTGGTTTGGCCTTCTCCTAA
TAATTAGCAAACTTGGAAAGCAGATTAACTTTCTAATTGTTGGCCAATTA
GGGCTGTTTCTACTCTTCACAATTCCCAAAATGTGTGAGATGAATAGACG
TTCATCAAATATTGTACAACTTCCTAAATTTAATAAACAATATCAAATTA
CCAAAGTAAACGCTTCGACCGAAACCCAGAATGCATTGGACATGGAATCC
TTAAAAGAGTGCAACGAGGACACCATAAAGCTAATTGAAAAGCAACCAGA
AGGGATGGATCTCTCACTCGGCTGTGATATTACCAAGGAATCCCAGAATG
CGGCTGATGATCTTAAAGCCTTTAAAGTAAAGGAGGAAATAGACATTGAT
GCTTTTGAGCGACTTGCCGATTCCTGGTCCGACGAAGATACACTTACTGA
TCAAAAAAATGCAAGCTTTCTAGACCAT
FMO11075.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:00:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42853-RA | 1001 | CG42853-RA | 63..914 | 9..860 | 4260 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:00:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 18121434..18121927 | 502..9 | 2470 | 100 | Minus |
3L | 28110227 | 3L | 18121019..18121379 | 860..500 | 1805 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:00:04 has no hits.
FMO11075.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 10:00:53 Download gff for
FMO11075.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42853-RA | 63..919 | 9..868 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:08:39 Download gff for
FMO11075.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42853-RA | 63..919 | 9..868 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:56:36 Download gff for
FMO11075.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42853-RA | 63..919 | 9..868 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:56:36 Download gff for
FMO11075.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 18121014..18121377 | 502..868 | 98 | <- | Minus |
3L | 18121435..18121927 | 9..501 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:08:39 Download gff for
FMO11075.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 18114114..18114477 | 502..868 | 98 | <- | Minus |
arm_3L | 18114535..18115027 | 9..501 | 100 | | Minus |