FMO11081.5prime Sequence
452 bp (452 high quality bases) assembled on 2011-11-18
> FMO11081.5prime
CAGTCGACATGTGCATTTGCTCAACTCGTGTACTCAAAATCGTTCTTTTG
GCATTCATACATCTTGCCGCAGGATTTAATGGCGCGCAAATAGCGAAGGA
CATTACTTTGCTGGATAAACTGGTGGGTCACCATCATGTTATGCTTACTA
TAAGTCTAGCACTATGTGTTATCATACTAGTTGTTCTCTTAGTTGCCATT
TTTGCTGCTATTCGTCATCATATATTGGCTTTAAACGTGACGCTTGTTTT
CTTGATTTTTAAGTGTGTAGCAAAGGGTATTATCGTAATCGTTTGCGTAT
TAACCGCAGAAACAGGTATTGAAAATACTGCCGCACATTTTTGGTTCTTT
CTATGCTGGAAATTCACGTGTTGCTGTATGCTCTTTAATCTATTCTTTTA
TATACGGCTAACAGAGAATTCAAGACAAGCTGACGCAAGCTTTCTAGACC
AT
FMO11081.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:01:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42661-RB | 2597 | CG42661-RB | 44..469 | 9..434 | 2130 | 100 | Plus |
CG42661-RA | 2531 | CG42661-RA | 44..469 | 9..434 | 2130 | 100 | Plus |
CG42660-RB | 2597 | CG42660-RB | 44..469 | 9..434 | 2130 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:00:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 7465670..7465837 | 72..239 | 840 | 100 | Plus |
3L | 28110227 | 3L | 7465900..7466029 | 239..368 | 650 | 100 | Plus |
3L | 28110227 | 3L | 7466086..7466152 | 368..434 | 335 | 100 | Plus |
3L | 28110227 | 3L | 7465552..7465615 | 9..72 | 320 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:00:59 has no hits.
FMO11081.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 10:00:58 Download gff for
FMO11081.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tsp66A-RD | 44..474 | 9..442 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:09:07 Download gff for
FMO11081.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42660-RA | 44..474 | 9..442 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:57:02 Download gff for
FMO11081.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42660-RB | 44..474 | 9..442 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:57:02 Download gff for
FMO11081.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 7465552..7465614 | 9..71 | 100 | -> | Plus |
3L | 7465670..7465837 | 72..239 | 100 | -> | Plus |
3L | 7465901..7466029 | 240..368 | 100 | -> | Plus |
3L | 7466087..7466157 | 369..442 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:09:07 Download gff for
FMO11081.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 7458652..7458714 | 9..71 | 100 | -> | Plus |
arm_3L | 7458770..7458937 | 72..239 | 100 | -> | Plus |
arm_3L | 7459001..7459129 | 240..368 | 100 | -> | Plus |
arm_3L | 7459187..7459257 | 369..442 | 94 | | Plus |