FMO11083.5prime Sequence
389 bp (389 high quality bases) assembled on 2011-11-18
> FMO11083.5prime
CAGTCGACATGCAGCTGAGTATTATAGTATTGCTCTTGTGCTCGGTGGTT
GTTGCAAATTCACTTGCCCCAAGTCAACTGGCATCGAAAACCCCATCACC
CAATGTAAGCAAGGATCAGCCGTCATCCAGGGAGGAGAAACCCAGTTTGA
AACCGTGCAAACCCATCGAGACTGTGAGTTCAGAGCCAAAAGGACTAGGC
AATACTCCTAAAGTCGGTTCAATTACTCCGGAATCAGCTAAAACGTCTGG
CACAACCGTGGATAAAAGTCTGGATGATTGCGAACCCATTCCCGAGGGTA
TTGGATCTCGATTGAATGCGAGAACTCTTCAAACACTGGTTATAAAAAAT
AATAATAACCCTCTTTTTAATGCAAGCTTTCTAGACCAT
FMO11083.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:01:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43093-RA | 476 | CG43093-RA | 4..366 | 9..371 | 1815 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:01:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 22769885..22770235 | 371..21 | 1755 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 00:01:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
gypsy5 | 7369 | gypsy5 GYPSY5 7369bp | 5929..5965 | 321..357 | 113 | 78.4 | Plus |
FMO11083.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 10:00:59 Download gff for
FMO11083.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43093-RA | 2..366 | 7..371 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:09:12 Download gff for
FMO11083.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43093-RA | 2..366 | 7..371 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:57:07 Download gff for
FMO11083.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43093-RA | 2..366 | 7..371 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:57:07 Download gff for
FMO11083.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22769885..22770235 | 21..371 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:09:12 Download gff for
FMO11083.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18595607..18595957 | 21..371 | 100 | <- | Minus |