FMO11085.5prime Sequence
359 bp (359 high quality bases) assembled on 2011-11-18
> FMO11085.5prime
CAGTCGACATGAAATTACTCTCTGCGGTTCTTCTAATAGGTACCTTAAGT
GCCATTTGTCTTGGCCAAAAGGAACCCATATGCAGGTCTGATCCGAGTGT
TGTCGGAAATTGTGGGCATAAAATTAAAGGGTATACCTATGAAGTTCGAA
AAAATAATTGCAAGAAGTTCCGGGCGATGGCCTGTAAGGTAACTGGAAAC
TTTTTCCGTAGCAGGGATGCGTGCAATGCGAAGTGCAAGGACACCAGGAA
GCCAGCTCAAAGCGGAGTCATTGAATTCTTCAGTCGAACGGTGTCGCAGT
TTCTGCAGATGATCTTAAGCCTAATGAGTTGGGCCGGATTTGCAAGCTTT
CTAGACCAT
FMO11085.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:58:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42463-RB | 384 | CG42463-RB | 15..347 | 9..341 | 1665 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:58:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 3668728..3668993 | 341..76 | 1330 | 100 | Minus |
2L | 23513712 | 2L | 3669054..3669120 | 75..9 | 335 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:58:31 has no hits.
FMO11085.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 10:00:46 Download gff for
FMO11085.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42463-RB | 7..351 | 1..345 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:07:56 Download gff for
FMO11085.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42463-RB | 7..351 | 1..345 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:56:00 Download gff for
FMO11085.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42463-RB | 7..351 | 1..345 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:56:00 Download gff for
FMO11085.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3668730..3668993 | 76..339 | 100 | <- | Minus |
2L | 3669054..3669128 | 1..75 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:07:56 Download gff for
FMO11085.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 3668730..3668993 | 76..339 | 100 | <- | Minus |
arm_2L | 3669054..3669128 | 1..75 | 96 | | Minus |