Clone FMO11085 Report

Search the DGRC for FMO11085

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:110
Well:85
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG42463-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11085.5prime Sequence

359 bp (359 high quality bases) assembled on 2011-11-18

> FMO11085.5prime
CAGTCGACATGAAATTACTCTCTGCGGTTCTTCTAATAGGTACCTTAAGT
GCCATTTGTCTTGGCCAAAAGGAACCCATATGCAGGTCTGATCCGAGTGT
TGTCGGAAATTGTGGGCATAAAATTAAAGGGTATACCTATGAAGTTCGAA
AAAATAATTGCAAGAAGTTCCGGGCGATGGCCTGTAAGGTAACTGGAAAC
TTTTTCCGTAGCAGGGATGCGTGCAATGCGAAGTGCAAGGACACCAGGAA
GCCAGCTCAAAGCGGAGTCATTGAATTCTTCAGTCGAACGGTGTCGCAGT
TTCTGCAGATGATCTTAAGCCTAATGAGTTGGGCCGGATTTGCAAGCTTT
CTAGACCAT

FMO11085.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:58:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG42463-RB 384 CG42463-RB 15..347 9..341 1665 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:58:30
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3668728..3668993 341..76 1330 100 Minus
2L 23513712 2L 3669054..3669120 75..9 335 100 Minus
Blast to na_te.dros performed on 2014-11-26 23:58:31 has no hits.

FMO11085.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 10:00:46 Download gff for FMO11085.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42463-RB 7..351 1..345 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:07:56 Download gff for FMO11085.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42463-RB 7..351 1..345 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:56:00 Download gff for FMO11085.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42463-RB 7..351 1..345 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:56:00 Download gff for FMO11085.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 3668730..3668993 76..339 100 <- Minus
2L 3669054..3669128 1..75 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:07:56 Download gff for FMO11085.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 3668730..3668993 76..339 100 <- Minus
arm_2L 3669054..3669128 1..75 96   Minus