FMO11086.5prime Sequence
890 bp (890 high quality bases) assembled on 2011-11-18
> FMO11086.5prime
CAGTCGACATGAATAAAATGGAAGAAAACTTCTACAATGGATGCACTTGT
TGCCATTGCTCTTGCCGCCGCTCTTGCTCTTGCTCGTCTTTAAAACGATG
CAATTCCGCTGAATCGTGTCGCTTACTTATTCAGAAAAGTTCGAAATATA
TATACGATGGCGTTAGATGCTCAGATCTCAGATGTCCATACTGCAACGAA
GCGCTTGGACAGAAAATCCTTTTATCGCACTCGGCGGAGTCCACTGCTCG
AACGCCACAACAAACGCGGATTTCCGACATACAGTTTAGTCATTCGGATA
AAGGACGAAAAAGTTACAGTAAAATGAAATCGATGTCCGGATTTGAAGAG
CCTAAAGATCAAGTTCAATATAAGAAGAGAGAGTCTAGCATATCAACACC
ATTCAGTTGCTATAGGGAGGATTCGCCAAGGTCCTCGTCCAGAGTTAAGT
CTACCGGAAAGTACAGTTGCAACTGCTTCACAAAGGAACAGCCAAGAAAG
TATGTTTCAAAGACTGCCGAAGAAATCAGAAGGACGGTTCGAGCGGAGAT
TGCAGAGATGGAGCAAAAGCAGGCAATGGCAGACAAAAATGGATGTGATT
TTACTTTTTGCAAGCCACCGCAGAGTGGACGATTGTCATCTAATGAAGAA
ACCAAGAGTAAATCTAAAGATGAAGAGATTTTTACGGAGTCCGAGAAATT
GATACTTAGCAAAATTGATTGGCGTACTACTGCCACCAATGATTTGTCTA
ATTCCGAGGTAATTTATTCGACGATAAAGCGCTTGCTGCGCGTATGTCTG
AACAACAAGATAATCGAACTTGGGCTCCTGGATAGTCTGCATGATGCGAT
AGCACAATTCAAACGAGACAACGCAAGCTTTCTAGACCAT
FMO11086.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:58:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43077-RA | 1000 | CG43077-RA | 67..930 | 9..872 | 4320 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:58:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17067374..17067977 | 872..269 | 3020 | 100 | Minus |
| X | 23542271 | X | 17068131..17068304 | 269..96 | 870 | 100 | Minus |
| X | 23542271 | X | 17068371..17068457 | 95..9 | 435 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:58:40 has no hits.
FMO11086.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 10:00:47 Download gff for
FMO11086.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43077-RA | 67..933 | 9..876 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:08:02 Download gff for
FMO11086.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43077-RA | 67..933 | 9..876 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:56:03 Download gff for
FMO11086.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43077-RA | 67..933 | 9..876 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:56:03 Download gff for
FMO11086.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17067371..17067976 | 270..876 | 99 | <- | Minus |
| X | 17068131..17068304 | 96..269 | 100 | <- | Minus |
| X | 17068371..17068457 | 9..95 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:08:02 Download gff for
FMO11086.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16961404..16962009 | 270..876 | 99 | <- | Minus |
| arm_X | 16962164..16962337 | 96..269 | 100 | <- | Minus |
| arm_X | 16962404..16962490 | 9..95 | 100 | | Minus |
