FMO11087.5prime Sequence
383 bp (383 high quality bases) assembled on 2011-11-18
> FMO11087.5prime
CAGTCGACATGGGCTGTTCTCCGAGTACTTTGCCCCCCGCCCCTTCCGCT
GGTCAGACCGGCGAACGAGGATCCCTGCCGCTGGACGCCTCTGAAAAGGA
CGAGAGCCGCCTCTTCTGCATCAAGCTGCGGCGCAGCCGCCTGCGCCGCT
GCAGCTGTGGGGGCGTGACCTTGCAGCCCCCCAGCGACGGGAATGGCAGC
ACGGCCGGAGACAACCTGTGCGGCCAGGTGCTCCTCAATCCGCTGCAGAC
CAAGAGCGAGGCCGACTACGAAAAGCTGAGCACCGGCAAAAAGGACTCGA
TTGTGACGGTGGCCGCCCTGGGCAACTTTACACACAGCGTAGTGCGACGG
GCCACTGGAAGTAAGGCAAGCTTTCTAGACCAT
FMO11087.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:58:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pde8-RK | 5389 | CG45019-RK | 489..842 | 8..361 | 1770 | 100 | Plus |
| Pde8-RI | 5562 | CG45019-RI | 662..1015 | 8..361 | 1770 | 100 | Plus |
| Pde8-RN | 3939 | CG45019-RN | 775..1128 | 8..361 | 1770 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:58:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23665620..23665887 | 8..275 | 1340 | 100 | Plus |
| 2R | 25286936 | 2R | 23665949..23666040 | 274..365 | 460 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 23:58:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dsim\ninja | 6644 | Dsim\ninja DSRN 6644bp Derived from D83207 (Rel. 53, Last updated, Version 4). | 2149..2217 | 99..168 | 113 | 64.3 | Plus |
FMO11087.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 10:00:48 Download gff for
FMO11087.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pde8-RF | 631..1000 | 1..371 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:08:06 Download gff for
FMO11087.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pde8-RN | 769..1136 | 1..368 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:56:06 Download gff for
FMO11087.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pde8-RN | 769..1136 | 1..368 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:56:06 Download gff for
FMO11087.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23665614..23665887 | 1..275 | 98 | -> | Plus |
| 2R | 23665951..23666046 | 276..371 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:08:06 Download gff for
FMO11087.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19553137..19553410 | 1..275 | 98 | -> | Plus |
| arm_2R | 19553474..19553569 | 276..371 | 96 | | Plus |
