FMO11089.5prime Sequence
275 bp (275 high quality bases) assembled on 2011-11-18
> FMO11089.5prime
CAGTCGACATGTGCAACGCCATTTGTGAATGCCTTAAATGTCCTGGCAAA
GTTATTTGCTGCTGCTGTTCCTGCGCCTGCAAGATGCTCCTGAGCATCGT
GTTTTCTGCGCTCCTGATGGTCGTGGTGATCGGCTTGATTGTCTACTTCA
CGGTCTTCTATCACAAGGATAAGAACACGGATGAGGTGCAGAAGCAGGTC
GCCCAACTGACGCCCATTGTGAAGCGCAGCATACGCGACTACTTCAACAA
GGAGTACGCAAGCTTTCTAGACCAT
FMO11089.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:59:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mex1-RB | 741 | CG7936-RB | 83..332 | 8..257 | 1250 | 100 | Plus |
mex1-RC | 1034 | CG7936-RC | 425..674 | 8..257 | 1145 | 97.2 | Plus |
mex1-RA | 710 | CG7936-RA | 101..350 | 8..257 | 1145 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:58:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15517833..15518034 | 257..56 | 995 | 99.5 | Minus |
3L | 28110227 | 3L | 15519457..15519510 | 61..8 | 270 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 23:58:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6747..6820 | 130..56 | 111 | 62.7 | Minus |
FMO11089.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 10:00:48 Download gff for
FMO11089.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mex1-RB | 77..338 | 1..264 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:08:11 Download gff for
FMO11089.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mex1-RB | 77..338 | 1..264 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:56:11 Download gff for
FMO11089.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mex1-RB | 77..338 | 1..264 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:56:11 Download gff for
FMO11089.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15517827..15518028 | 62..264 | 98 | <- | Minus |
3L | 15519457..15519513 | 1..61 | 93 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:08:11 Download gff for
FMO11089.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15510927..15511128 | 62..264 | 98 | <- | Minus |
arm_3L | 15512557..15512613 | 1..61 | 93 | | Minus |