FMO11091.5prime Sequence
755 bp (755 high quality bases) assembled on 2011-11-18
> FMO11091.5prime
CAGTCGACATGTCGGTGCAATGGAAAATTGTCATAATGAGCTTCTTTCTG
TTCAGTACCGCGCACGCTGGAGGATATTGTGGACCCAACAAGATATATGC
GTGTGTGCCTACGCTATTTTGTAAAGATGGTCGCAGCACGCAAAGAAATC
CCGCTGCTCACTTCAACAGGCAGTGCTTTTCGTTTGAATCTTGCTGTGAC
GTTAATAGGGTAATTTATGGAATGCGGTACACTGGAGGAGATTTCGAGCC
AGGTCCATACGAACAAATCAGCGAGCCATTCAACAATGCTAGTGGAAAAA
CTTCTGGCACAAACAGTCAACAGTCAACTGGTAATACGGGTGGCACTAGT
CCGACCTTGAAAAAAAAGGGCGGAGTGTCATCTATAACGAACATTCAAAA
TACTAATAATGGCGGAGGCAAAAATTTTACAACAAATAGTCAAATGCCGA
GTTATACGATGAAAAGTCAGCCATCCAATAACGCAGGTGGAAAAACCACT
ACTGCAAACAATCAGGCACCCAGTGACTCAGATGGAAAAACTTTTACACA
CAGTACAAATTTACATGCTCATAGTTATCTTAACAATAATTCCGGAAAAA
CTAACTTAGGAAACCCATCTACGGCTAATACTAAAAATACAAAAAGTCCA
AATTATCATCATTATCAAAATCATAATTACAATCCCAGTGGCAATTTGGG
CAGGGATGTTGGAGTTCATAGACTATCTTCAAACATTGCAAGCTTTCTAG
ACCAT
FMO11091.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:59:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42876-RA | 1104 | CG42876-RA | 11..740 | 8..737 | 3650 | 100 | Plus |
| CG42876-RB | 1513 | CG42876-RB | 11..740 | 8..737 | 3650 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:59:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15811344..15811872 | 737..209 | 2645 | 100 | Minus |
| 2L | 23513712 | 2L | 15811928..15812131 | 211..8 | 1020 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 23:59:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| looper1 | 1881 | looper1 LOOPER1_DM 1881bp | 1054..1140 | 539..623 | 124 | 65.2 | Plus |
FMO11091.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 10:00:50 Download gff for
FMO11091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42876-RA | 11..744 | 8..742 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:08:21 Download gff for
FMO11091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42876-RB | 11..744 | 8..742 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:56:20 Download gff for
FMO11091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42876-RB | 11..744 | 8..742 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:56:20 Download gff for
FMO11091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15811930..15812131 | 8..209 | 100 | | Minus |
| 2L | 15811341..15811871 | 210..742 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:08:21 Download gff for
FMO11091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15811341..15811871 | 210..742 | 99 | <- | Minus |
| arm_2L | 15811930..15812131 | 8..209 | 100 | | Minus |
