Clone FMO11092 Report

Search the DGRC for FMO11092

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:110
Well:92
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG42831-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11092.5prime Sequence

398 bp (398 high quality bases) assembled on 2011-11-18

> FMO11092.5prime
CAGTCGACATGGCGCTAATAAATGCTTATCGAAGACGCATAAAGCGAGTA
AATTCGCAGCCATTAAACGGGCATAAAACTCGAAGCCGGGGCCGAAGCGA
AATTGTGGGGCCGACAAATCAAAGTACAAGCCTCAGGACCAACCTCATTC
TCCTATTTCCCAGCCATGAAATAAAACCAGGCAACAATGAAACCCAAAGC
GTCTCCCAAGCGATTTCAATGCGGGCATTCATCGGTCGAGCCAAGGAATT
GGCCACCCACAAGACCCAAAACCCAGAACCCAAACTTCCAGTGAACCTTC
CACCCTCGTCACCTCCAGCACCCCATTTAAAGGCCCTTCCTTCGAGGCAA
CACTCGCTATATAACCATCTTACCCAACGTGCAAGCTTTCTAGACCAT

FMO11092.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:59:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG42831-RA 1266 CG42831-RA 250..622 8..380 1865 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:59:24
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 10815068..10815440 8..380 1865 100 Plus
Blast to na_te.dros performed on 2014-11-26 23:59:25 has no hits.

FMO11092.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 10:00:50 Download gff for FMO11092.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42831-RA 250..629 8..386 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:08:23 Download gff for FMO11092.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42831-RA 250..629 8..386 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:56:22 Download gff for FMO11092.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42831-RA 250..629 8..386 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:56:22 Download gff for FMO11092.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 10815068..10815447 8..386 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:08:23 Download gff for FMO11092.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 10808168..10808547 8..386 99   Plus