Clone FMO11093 Report

Search the DGRC for FMO11093

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:110
Well:93
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG43104-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11093.5prime Sequence

287 bp (287 high quality bases) assembled on 2011-11-18

> FMO11093.5prime
CAGTCGACATGATCGATAACCAAGGACTTTTCATCTCACCACTGCAGTGT
AGCTGCTTCGGCTGTAACAATTTGCGGAAATTAGCCAAGGTGTTTTATGG
TCATCACCATCGACTCACCCTCTGTCCACTATTACACTCATCGGATAAAG
GAGCCGTGGCACTGCGAAGTGGATTGTTGTCCGGCAACGTGGAAATGTTT
ACTTTTTCTTCGGTTTGCTTTTCCAACACTCTGTACCGAACGATGAGCTG
CCTTTGGGGGCTTTTTAATGCAAGCTTTCTAGACCAT

FMO11093.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-26 23:59:35 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:59:32
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 16737223..16737443 269..49 1105 100 Minus
2R 25286936 2R 16737717..16737759 49..7 215 100 Minus
Blast to na_te.dros performed on 2014-11-26 23:59:33 has no hits.

FMO11093.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 10:00:51 Download gff for FMO11093.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43104-RA 87..354 1..269 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:08:28 Download gff for FMO11093.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43104-RA 87..354 1..269 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:56:25 Download gff for FMO11093.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 16737223..16737442 50..269 100 <- Minus
2R 16737717..16737761 1..49 91   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:56:25 Download gff for FMO11093.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 16737223..16737442 50..269 100 <- Minus
2R 16737717..16737761 1..49 91   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:08:28 Download gff for FMO11093.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 12624728..12624947 50..269 100 <- Minus
arm_2R 12625222..12625266 1..49 91   Minus