FMO11095.5prime Sequence
881 bp (881 high quality bases) assembled on 2011-11-18
> FMO11095.5prime
CAGTCGACATGAGCACCTCACTAAGATCCGGCCGAGGAATCAAGCTTATG
AAGTCGGGCCATTTCTCAGATGTATGCATTCGCATAGATTGTATTAGCTT
CCGGTGCCACAAAATCATCTTAGCCTGTGCTTCTGAGTTTTTTGAGAGAT
TATTTCAAGAAGATTCGGAGGAATTTTTGTTAGATGGAACAACCCCAGAA
GTTTTTCAGATATTTCTTGATTTTATATACGCTCCTAACGATGACCAATT
CGGCAATCTTGAACCGGATGTATTGATGTGTCTTCTGAAGTGCGCAAATA
TGTGGCTCGCTGTGGAAATAGAAGAAAGATGCATCGACATTCTATTAGAT
CTATCCCCTGACATGGATCCGGATGCCCTTATTGCACTTTTTGCAGTGTC
GCATTGTGTGGATCACAAAGTATTAATGGAACAGTCTATTGGAGTCCTGC
AACATATATGGAGAAACGAAATGGACTGTCCATCAACTGTCAGAATGGAA
GTCGACTGCTTCGGAGAATATTTTAAAAACACCTCGGGAATGCTTTCTCC
GCGTAGGCGCTTTGTCATGGTGGAAAACTGGATAAAAGGCAATGATTTGA
ATAATAGACCGTGCTCTCAAAAAGATAAAATTAACCAAATTATTAAGAGC
ATTATCTTTTTGGAAATGTCATTGGAGGACTTTTACAATGGTCCAGGAAA
GTCTAACGTTTTGCCCGATTCAGACAAGTTCGAAATAATGTATAACTTGC
CCGTTCAATAATGAATGGACTGTTATATTGGACGAAAGGGATCGAGATAG
GTACTACATAATTGTTTTTGTGATGAAGAATTCGACTAAATTTGTGTTTA
TTTAAAGTTGATAGCAAGCTTTCTAGACCAT
FMO11095.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:58:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43120-RA | 1270 | CG43120-RA | 53..910 | 9..863 | 4155 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:58:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 14382048..14382469 | 24..445 | 2095 | 99.8 | Plus |
| 3L | 28110227 | 3L | 14382517..14382939 | 444..863 | 1920 | 98.6 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:58:13 has no hits.
FMO11095.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 10:00:45 Download gff for
FMO11095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43120-RA | 45..915 | 1..871 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:07:48 Download gff for
FMO11095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43120-RA | 45..915 | 1..871 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:55:52 Download gff for
FMO11095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43120-RA | 45..915 | 1..871 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:55:52 Download gff for
FMO11095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 14382050..14382467 | 26..443 | 99 | -> | Plus |
| 3L | 14382517..14382944 | 444..871 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:07:48 Download gff for
FMO11095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 14375150..14375567 | 26..443 | 99 | -> | Plus |
| arm_3L | 14375617..14376044 | 444..871 | 97 | | Plus |
