FMO11107.5prime Sequence
837 bp (837 high quality bases) assembled on 2011-12-01
> FMO11107.5prime
CAGTCGACATGGGAAAATTCGAATACTCACTGGGTCTCAATGAGCTCAAA
TCCAAGGAGCTGCGATTGTGGCAGGCCTTGATTGGAGAATTCCTTGGCAA
TTTGATCCTCAATTTCTTTGCCTGCGGCGCATGCACCCAAATTGAGGATG
GCACCTTCAAGGCCTTGGCTTTTGGCCTGGCTATCTTCATGGCCATCACG
ATTGTGGGCCACTTGAGTGGTGGTCATGTGAATCCTGCCGTTACCGCTGG
AATGTTGGTCGCAGGACGAATTAGCTTGATCAGAGCCTTTTTCTATGTGG
TTTTCCAGTGCTTGGGTGCAATTGCCGGAACTGCAGCGGTTAAGATTCTC
ATCGATCAGGACTATTACAATGGCCTGGGTCACACCTCTCTGGCGCCCAA
TATCACCGAGCTGCAGGGCCTGGGAATCGAGTTCTTCCTGGGACTCCTGC
TGGTGCTCGTCGTCTTTGGGGCCTGTGATCCCCACAAGCCCGATTCCCGC
TACACGGCGCCCTTGGCCATCGGAATGGCGGTGACCCTGGGTCACTTGGG
CACCATCCGCTACACCGGGGCCAGCATGAATCCCGCTCGCACCGTGGGCA
CCGCCTTTGCCACCGACATCTGGGCGTCGCATTGGGTATACTGGGTGGGA
CCTGTGCTGGGGGGCGTGGCTGCCGCCCTGCTCTACACCCAGGTCCTGGA
GGCGAAGCCCGTGCCAAAGGTTAACGAGGCATCCGAGAAGTACCGAACGC
ACGCCGATGAACGCGAGGGGATGCAAACCTGACCACAACCCGAACCATTT
GGCATATACATATCTCGCTGCAAGCTTTCTAGACCAT
FMO11107.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:03:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7777-RC | 1479 | CG7777-RC | 216..1025 | 9..819 | 4000 | 99.6 | Plus |
| CG7777-RB | 1386 | CG7777-RB | 216..975 | 9..768 | 3800 | 100 | Plus |
| CG7777-RD | 1388 | CG7777-RD | 216..974 | 9..767 | 3795 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:03:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11441066..11441491 | 343..768 | 2130 | 100 | Plus |
| 2R | 25286936 | 2R | 11439968..11440125 | 43..200 | 790 | 100 | Plus |
| 2R | 25286936 | 2R | 11440186..11440330 | 200..344 | 725 | 100 | Plus |
| 2R | 25286936 | 2R | 11441649..11441700 | 768..819 | 230 | 96.2 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:03:29 has no hits.
FMO11107.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-01 08:56:52 Download gff for
FMO11107.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7777-RC | 208..1027 | 2..826 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:10:17 Download gff for
FMO11107.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7777-RC | 211..1030 | 2..826 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:57:52 Download gff for
FMO11107.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7777-RC | 211..1030 | 2..826 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:57:52 Download gff for
FMO11107.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11439970..11440125 | 45..200 | 100 | -> | Plus |
| 2R | 11440187..11440330 | 201..344 | 100 | -> | Plus |
| 2R | 11441068..11441490 | 345..768 | 99 | -> | Plus |
| 2R | 11441650..11441705 | 769..826 | 91 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:10:17 Download gff for
FMO11107.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7327475..7327630 | 45..200 | 100 | -> | Plus |
| arm_2R | 7327692..7327835 | 201..344 | 100 | -> | Plus |
| arm_2R | 7328573..7328995 | 345..768 | 99 | -> | Plus |
| arm_2R | 7329155..7329210 | 769..826 | 91 | | Plus |
