Clone FMO11110 Report

Search the DGRC for FMO11110

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:111
Well:10
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG42781-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11110.5prime Sequence

143 bp (143 high quality bases) assembled on 2011-12-01

> FMO11110.5prime
CAGTCGACATGTCCCCTGGCCACTTAATCCTGCTGCAGTTCAGCATGCAC
TGTTTCAAGATCATTTTCATCTATTGCATCTGTGTTAATGTCCTGGAGCA
TCTTGTTCAAAGCGTCCAGGAACACGCAAGCTTTCTAGACCAT

FMO11110.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:02:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG42781-RA 258 CG42781-RA 83..200 8..125 590 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:02:09
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 7382791..7382908 125..8 590 100 Minus
Blast to na_te.dros performed on 2014-11-27 00:02:10 has no hits.

FMO11110.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-01 08:56:45 Download gff for FMO11110.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42781-RA 1..120 9..128 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:09:40 Download gff for FMO11110.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42781-RA 45..170 1..129 96   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:57:21 Download gff for FMO11110.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42781-RA 79..204 1..129 96   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:57:21 Download gff for FMO11110.5prime
Subject Subject Range Query Range Percent Splice Strand
X 7382787..7382912 1..129 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:09:40 Download gff for FMO11110.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 7276820..7276945 1..129 96   Minus