FMO11111.5prime Sequence
1032 bp (999 high quality bases) assembled on 2011-12-01
> FMO11111.5prime
CAGTCGACATGGGTCGCAGTAAGGTGTTAAGAAAGAAGCAATCTAGCAAG
AAGCGACGACATACAATTGATCAAGAAAATACAGACGATTATTATATGAC
ACCCGAAGAAGTACGGCAATCGGTTGAGCGGTGGTCATTCCTTTGGCACT
GTAGTGATTCTGATTCTGATTCTAATTCCGAATCGGAGAGCAGTTCAACG
TCATCATTGTTGCAACATGATCCATCTCTGTATGGAGACTGGCGTGTGCG
GGGTGAAGAATTCAAATTAGAGACTACCGGCAAGGAAATGCTGATGAATT
TAAGCAAATTTCCCTTTCCGGAGATAATCAAACCACCCGTTTTGCTGGAT
ACTAAGTTGCCCAAAACCCTGCGGGTTAATCACTGGCCCTATATTACACA
CAAAATTTTCGACTACGTAATGCCGGACATATATTTTCGGTCCATGGAGT
TCATGAAGAAACCCGTATGTGAGGGAGCCGTGGGTTATGATCCTTTGTAC
TATGGCTCATCAATTTTGATCAAACCTCTGTGCAAGTACAGTAAGCCACG
CAATTTTTCACCCACATGGACCAATACTAGCTTGGTGTCCTGGATAGATG
GGCGTCGTTTTGCCAAGATGGTGAAACGTAATGACTCGCAGATGGGTAAT
GAGAAGCTACTTCGGTGGACTAAGGTTCGCCCGTTTTGGAGCAATAAACT
CCTGGCTGGACTTAGAAAGGACCCGGACGCTAAACTAATTGTAAGGTGGA
AGCGTCCCAGGACAAGATTTTCTTTTAATCCGGAATCCGATGCGATGGAC
AAACAATGGGATATGCCCGAGGAGGACCCGTTGCCATCGGATGAGTTTTA
CGTAGAATATGTAATGAATGATGATCCCGAAACACAACGATCATGGAACT
CCTCGTTGTCTGACGATTCTATGCCGGGATAACTAAATCCCAGTCTGATC
TCATCTCGATATTTAAAGATAGGCCGATATTAAGACGTTGTCATAGTCGA
GCAGTCTTTTTGCAGCTTTCTAGACCAATCCG
FMO11111.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:02:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32720-RB | 1335 | CG32720-RB | 71..1078 | 9..1011 | 4915 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:02:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7535882..7536889 | 1011..9 | 4790 | 99.5 | Minus |
Blast to na_te.dros performed 2014-11-27 00:02:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib2 | 2844 | transib2 TRANSIB2 2844bp | 2539..2571 | 157..189 | 120 | 84.8 | Plus |
FMO11111.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-01 08:56:45 Download gff for
FMO11111.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32720-RB | 1..1011 | 9..1015 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:09:44 Download gff for
FMO11111.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32720-RB | 71..1089 | 9..1022 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:57:25 Download gff for
FMO11111.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32720-RB | 71..1089 | 9..1022 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:57:25 Download gff for
FMO11111.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7535871..7536889 | 9..1022 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:09:44 Download gff for
FMO11111.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7429904..7430922 | 9..1022 | 99 | | Minus |
