FMO11115.5prime Sequence
227 bp (227 high quality bases) assembled on 2011-12-01
> FMO11115.5prime
CAGTCGACATGAAAAGATGCAGCCGTATAAATCGCACTGGAATTGAGCGA
TCGCAGTTATTGACTCGTCTCAATTGTCGCAGCGATGAAGTGGTTTTCGA
TTTTGTTTGCGCTACTGGCGCTCATTTTCTTCGTCGAATTTGGATATGCT
CGAACAATTCCCAGGATTACCATTCGCAATGGCGACATTATAGTTCATGG
CAATTGCAAGCAAGCTTTCTAGACCAT
FMO11115.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:04:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43202-RA | 390 | CG43202-RA | 1..206 | 4..209 | 1015 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:04:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18381696..18381845 | 152..3 | 735 | 99.3 | Minus |
2R | 25286936 | 2R | 18381577..18381634 | 209..152 | 290 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:04:40 has no hits.
FMO11115.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-01 08:56:57 Download gff for
FMO11115.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42737-RA | 1..209 | 4..212 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:10:52 Download gff for
FMO11115.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43202-RA | 1..211 | 4..216 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:58:20 Download gff for
FMO11115.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43202-RA | 1..211 | 4..216 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:58:20 Download gff for
FMO11115.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18381572..18381634 | 152..216 | 93 | <- | Minus |
2R | 18381697..18381846 | 1..151 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:10:52 Download gff for
FMO11115.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14269077..14269139 | 152..216 | 93 | <- | Minus |
arm_2R | 14269202..14269351 | 1..151 | 98 | | Minus |