FMO11116.5prime Sequence
368 bp (368 high quality bases) assembled on 2011-12-01
> FMO11116.5prime
CAGTCGACATGGAATCCCCGGACAACAGGCTGTACATGTGCACCGCGTGC
TTTAAAAGGTTTCTTTGGAGCGAACTGTCGAGGAAGGAGCTCCGCTGCGC
TCAGTGCCGTCTGTCAACCAAAATCTGTGTCATTTGCGATAAGAAGTTTG
AGCCGCGCGAAATGTCGCAAGTTTACTGCAAGCAATGCAATTTCTACATC
GAGAGACATGCCGTAGTCAAGCCCCCTCCCTTGGGTGTACAAATCGGAAA
ACCAGCGGAGATGACCAGTGGGCCAGGTACGGAAGGATCTTCGATCACAG
AGCGCTGGAAGGAGATTAAGGCCGCCGCTGGAATCGTGGATGACTTTGAT
GCAAGCTTTCTAGACCAT
FMO11116.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:04:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34029-RA | 460 | CG34029-RA | 52..396 | 6..350 | 1725 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:04:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21970831..21971175 | 350..6 | 1725 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:04:45 has no hits.
FMO11116.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-01 08:56:58 Download gff for
FMO11116.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34029-RA | 9..362 | 1..354 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:10:54 Download gff for
FMO11116.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34029-RA | 42..395 | 1..354 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:58:22 Download gff for
FMO11116.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34029-RA | 47..400 | 1..354 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:58:22 Download gff for
FMO11116.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21970827..21971178 | 1..354 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:10:54 Download gff for
FMO11116.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17858332..17858683 | 1..354 | 98 | | Minus |
