Clone FMO11117 Report

Search the DGRC for FMO11117

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:111
Well:17
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG43111-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11117.5prime Sequence

449 bp (449 high quality bases) assembled on 2011-12-01

> FMO11117.5prime
CAGTCGACATGAATCATCTGTTCGTGTTAACTTTTATTCTGCTTTTTGCC
TTTGCCTTGGGATCCGAAGGTGAATTGACCGAAATGTGCCAACCACAATT
AAACAGAAGAGACCTATTCGACATAGCCGTGTTGGCCGCCATAAAGGTTC
TCATCCGTCAGATTGAGAGCTACAACGAGGATCGGCCTATCTCTTCAAGC
CTGATGGTTCACATTACGACTATGGTCTCCAAGTACATCCTGACCGGTAA
GAGCGTAAAGTTCATCCTTCGGCTGCTCTATGTGGCATGCCGTATGAACA
AACCGCTGACACAAGAAAATAAAAAACAAGCTCCAGTCCGCACAGCATTC
TTATGCTTGTTGGAATTGGGCAAAGAAAAGTGCTATACATACAAGGAAAA
GGCGGAAGGAGACTTCTCTGTGGAGTTGCAAGCAAGCTTTCTAGACCAT

FMO11117.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:04:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG43111-RA 553 CG43111-RA 41..463 9..431 2115 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:04:53
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19552162..19552582 11..431 2105 100 Plus
Blast to na_te.dros performed on 2014-11-27 00:04:55 has no hits.

FMO11117.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-01 08:56:59 Download gff for FMO11117.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43111-RA 35..469 1..439 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:10:58 Download gff for FMO11117.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43111-RA 35..469 1..439 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:58:26 Download gff for FMO11117.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43111-RA 35..469 1..439 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:58:26 Download gff for FMO11117.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 19552152..19552588 1..439 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:10:58 Download gff for FMO11117.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15439657..15440093 1..439 97   Plus