FMO11121.5prime Sequence
185 bp (185 high quality bases) assembled on 2011-12-01
> FMO11121.5prime
CAGTCGACATGTTGATTGCCCGACTTGGATTCTTGTTGTGCTCATTGGGC
CTTGCAACTGCCATATGTCAAACGAATGGGGAAAGTTGTAAGTCGCATGC
GGATTGCTGCTCCACGATGTGCCTGACCCAACTGGGTCAGTGTTCACCCA
AAAGGGGAGATCAGTGGGCAAGCTTTCTAGACCAT
FMO11121.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:05:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43061-RA | 329 | CG43061-RA | 30..188 | 9..167 | 795 | 100 | Plus |
Sfp93F-RA | 329 | CG42608-RA | 30..188 | 9..167 | 765 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:05:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 8049838..8049918 | 87..167 | 405 | 100 | Plus |
3R | 32079331 | 3R | 21736050..21736130 | 167..87 | 405 | 100 | Minus |
3R | 32079331 | 3R | 8049702..8049779 | 9..86 | 390 | 100 | Plus |
3R | 32079331 | 3R | 21736190..21736267 | 86..9 | 360 | 97.4 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:05:35 has no hits.
FMO11121.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-01 08:57:01 Download gff for
FMO11121.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43061-RA | 23..193 | 1..175 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:11:16 Download gff for
FMO11121.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43061-RA | 23..193 | 1..175 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:58:43 Download gff for
FMO11121.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43061-RA | 23..193 | 1..175 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:58:43 Download gff for
FMO11121.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 21736045..21736130 | 87..175 | 95 | <- | Minus |
3R | 21736190..21736274 | 1..86 | 93 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:11:16 Download gff for
FMO11121.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 17561767..17561852 | 87..175 | 95 | <- | Minus |
arm_3R | 17561912..17561996 | 1..86 | 93 | | Minus |