Clone FMO11125 Report

Search the DGRC for FMO11125

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:111
Well:25
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG42688-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11125.5prime Sequence

176 bp (176 high quality bases) assembled on 2011-12-01

> FMO11125.5prime
CAGTCGACATGTGCTGCAATCCTGGAGGCTGCTGCAACCTGCCCTCCTGC
ATCCAGTGCACCAACTTTTGTTTCAACTGCTGGACGGGAACTGCTGCAGT
GCCATGTTGCCGAGGTAGTTGCATTCCGGGATGCAGTAGCAGCCCTGGAT
GCCGTTGCGCAAGCTTTCTAGACCAT

FMO11125.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:06:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG42688-RB 785 CG42688-RB 345..494 9..158 750 100 Plus
CG42688-RA 397 CG42688-RA 183..332 9..158 750 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:06:11
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19182256..19182405 158..9 750 100 Minus
Blast to na_te.dros performed on 2014-11-27 00:06:13 has no hits.

FMO11125.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-01 08:57:04 Download gff for FMO11125.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42688-RA 194..343 9..158 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:11:35 Download gff for FMO11125.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42688-RA 183..332 9..158 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:58:57 Download gff for FMO11125.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42688-RA 183..332 9..158 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:58:57 Download gff for FMO11125.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 19182256..19182405 9..158 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:11:35 Download gff for FMO11125.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19182256..19182405 9..158 100   Minus