FMO11128.5prime Sequence
955 bp (955 high quality bases) assembled on 2011-12-01
> FMO11128.5prime
CAGTCGACATGTTAAGCAGGAGGGTCATCGCATTCGCCGCTCTGGCCCTC
ATCCAGATAGCCAGCGGTCAGGCCTCGCAATTCAGCAGGGACGAAAGTCA
GGAGGATCAGAAGACGGAGTTTAACCTGGCCTCCACTCTGACGGGAGGCA
TTACCAGCAGTCGCCATCGCCAGCGGGCCAATCTCAATTCGCAACTTTAT
CCTGGCCTTGGTCAGCTGGGATCGGGTTATGCGGGCGCAACTGGATCCAT
CGACGATGCCCATGGCCATGAGCAGGGTGGCTCTGGCGTACGAGTGGCCA
GAGGTCACCAGATTCCCGCTTATCCGCCTCCGGGTTTTCCTGGACAACAG
GCTCCAGTTCCGTACCCAGCTGCAGGAGGCTCTTCAGGAGGATCCTCATC
ATCCGGTGGTTACCAAAGTGCAGGTGCTGTTTCTCCTCCTGGCTATCCTG
TTGCTGGAGCAGTTCCTGCTCAGTATCCGGTGGGAGTTCCTCCCCAGCAG
CCAGTGGGTGCAGGAGCACCTGGTTACTTCCCGGGAACTGGTGCCTATCC
TGGCTATCCCTACCCCGGAGTATACTTGCCACAGTACCCAGCGTACCCTC
AACCAGCCCAGTTCCCCGCCTATGGAGTGCTACCCGGAGCTGTGGCTCAA
CCAGGAGTTCCTGGAGTAGCTGGAGTTCCGGGAGCACCTGGAGTGGCAGG
AGTGCCCGGAGCAGCTGGTCAGGCTCCTGCCACCAGCGGCATGAACTATC
ATCGCTATCCGGCTCACAATCCCGCTGATCCGAGCCATTGGGACCATCAT
TTCTCGATGAACACCGAGTACAAAGGAGGATGGCGTCCACAAAGGGACCA
TTTGGAGTGCTGAACAATCACAATGCCTTTGGCTATGGCAGTGGATAATG
GGGGCGGATACAACGGTGCCTTCAACTCGCCGGCCTACGCAGCTTTCTAA
ACAAT
FMO11128.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:06:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ela-RB | 1127 | CG7021-RB | 20..947 | 8..938 | 4580 | 99.7 | Plus |
| Ela-RC | 2135 | CG7021-RC | 373..1007 | 301..938 | 3115 | 99.5 | Plus |
| Ela-RA | 1187 | CG7021-RA | 373..1007 | 301..938 | 3115 | 99.5 | Plus |
| Ela-RC | 2135 | CG7021-RC | 20..313 | 8..301 | 1470 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:06:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24866010..24866523 | 422..938 | 2435 | 99.4 | Plus |
| 3R | 32079331 | 3R | 24865369..24865662 | 8..301 | 1470 | 100 | Plus |
| 3R | 32079331 | 3R | 24865722..24865846 | 301..425 | 625 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:06:41 has no hits.
FMO11128.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-01 08:57:06 Download gff for
FMO11128.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ela-RB | 12..953 | 1..944 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:11:48 Download gff for
FMO11128.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ela-RB | 13..954 | 1..944 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:59:09 Download gff for
FMO11128.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ela-RB | 13..954 | 1..944 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:59:09 Download gff for
FMO11128.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24865362..24865661 | 1..300 | 99 | -> | Plus |
| 3R | 24865722..24865844 | 301..423 | 100 | -> | Plus |
| 3R | 24866012..24866530 | 424..944 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:11:48 Download gff for
FMO11128.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20691084..20691383 | 1..300 | 99 | -> | Plus |
| arm_3R | 20691444..20691566 | 301..423 | 100 | -> | Plus |
| arm_3R | 20691734..20692252 | 424..944 | 99 | | Plus |
