Clone FMO11133 Report

Search the DGRC for FMO11133

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:111
Well:33
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG43056-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11133.5prime Sequence

272 bp (272 high quality bases) assembled on 2011-12-01

> FMO11133.5prime
CAGTCGACATGAAGTTACTCTGGCTGCTGTTAGTGGGCGTTGTTGCCGGG
CAACCTTGTGATAAGCTCTGTCCCATCAATAATAACTTCGGATGTGTCAG
CAAGGACAATAAATGCTTTTACACCGTTCGCAATCCATGTATTTTGAAGG
CCATTAACTGCTATCGTAAATCGAAGAACTTATCTGTTTTGAAGCCCATT
TTGCGCAGCAAGTGCACCAATAAGGAAGTTCCAGTTTGCGAGAATATCAA
TAAAGCAAGCTTTCTAGACCAT

FMO11133.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:07:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG43056-RA 303 CG43056-RA 33..278 9..254 1230 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:07:23
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 4437905..4438055 36..186 755 100 Plus
2L 23513712 2L 4438108..4438176 186..254 345 100 Plus
Blast to na_te.dros performed on 2014-11-27 00:07:25 has no hits.

FMO11133.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-01 08:57:10 Download gff for FMO11133.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43056-RA 33..283 9..262 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:12:07 Download gff for FMO11133.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43056-RA 33..283 9..262 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:59:26 Download gff for FMO11133.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43056-RA 33..283 9..262 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:59:26 Download gff for FMO11133.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 4438109..4438181 187..262 94   Plus
2L 4437819..4437846 9..36 100 -> Plus
2L 4437906..4438055 37..186 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:12:07 Download gff for FMO11133.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 4437819..4437846 9..36 100 -> Plus
arm_2L 4437906..4438055 37..186 100 -> Plus
arm_2L 4438109..4438181 187..262 94   Plus