FMO11134.5prime Sequence
1139 bp (1029 high quality bases) assembled on 2011-12-01
> FMO11134.5prime
CAGTCGACATGAGTGGTATGCAAACCACAACTGTGGACCCAGTACCCAGC
CCCCCACAGGAAACCATCATCATCGCCACCGCGCCACCACCTGAGCCCAG
AAAACCGGCTGTGACCACTAATAACCGAGGATACTTTACCCGCATCAATA
AACAGAATTATGCGTCCTATACAGTTTTCTTCCTATTCATCTATGGTGGC
ATGGACATGGCAGCCAGCTTGGGCTGGAGTCAACCCTACAGCGTCCTCCT
ATTCACGGAGTACTCGTACTGTTGGTTTGTAGGTGTCATCATTGGAGCGC
TGGCCACCACTCTCACCATGTCTTTTCTGCCCAAGCTGGTCTACTATGTT
TTTGGTGCTCTTATGCAACTAACTGGATCCATTATATTTACGGCTGCAGA
CTATTCCGCCTGCCTGGCGGCCCGCTATTTGGCCGGGTTAGGGATTGGCC
TCATTACGGTGCCATTCCTCATTCACAATGCTGAGGTGGCATCTAACAAC
TTACGAGGAGTCAACGGCGGAATGGAGCAGTGCGGTCTAGCCCTCGGAAT
TTTCTTTCAAGTGATTTTTACTACGGAGTGGACTTCATTAATTGACTCAA
ACCCAAACGAGATCCATGGCATCATAGGGATCGTCGTCTCATTGTTTGGT
TTGGCGATGACTGCCCTGGTGGTAGAGTCGCCAATCTTCTTTCTACGTCG
AAATATGGAGAACAGGGCGCAGCAGAGTCAGGAGAAACTTTTGAGACATA
ATCCCGGTGGCGTTAGTGCAGCTCTGAAGGAGCCAGAAAGTATGTGGCGG
AGAGCGACAACCGGACCCTGGGGGAGGAACTGGTGGCCTCGGTGATGCCC
TTCTTGAAATGCTACTCTTTCGCTGCTTCGTGGCATTCTCCTTCTCTCTG
CCGCTGACCATGTCGATCATCTCGAGCACGCAGTAGCGGAGAAAGGACTC
AGTCTTTGGCCAATCTACCTATTTGGCGTTCTCGTGTGATTGGAGTAATG
GTGGCTTTGATATTCTGAACCTTTTGGTTCGCAAGCGTGTCCTTGAGGGA
CTCCTTGTTATTGGCCGGAACTATGCTCCGATGGCGTTATATGCACGTGA
CCAACTTATTGCCTAACCTATGACTTCGCCTGCAATTCC
FMO11134.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:05:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6901-RA | 1581 | CG6901-RA | 40..1152 | 9..1108 | 5050 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:05:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 16323926..16324597 | 348..1015 | 3145 | 99.3 | Plus |
3R | 32079331 | 3R | 16323677..16323854 | 172..349 | 890 | 100 | Plus |
3R | 32079331 | 3R | 16323454..16323619 | 9..174 | 830 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:05:45 has no hits.
FMO11134.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-01 08:57:02 Download gff for
FMO11134.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6901-RA | 1..1002 | 18..1015 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:11:22 Download gff for
FMO11134.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6901-RA | 38..1050 | 6..1015 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:58:47 Download gff for
FMO11134.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6901-RA | 38..1050 | 6..1015 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:58:47 Download gff for
FMO11134.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 16323452..16323619 | 6..174 | 99 | -> | Plus |
3R | 16323680..16323852 | 175..347 | 100 | -> | Plus |
3R | 16323926..16324597 | 348..1015 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:11:22 Download gff for
FMO11134.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 12149174..12149341 | 6..174 | 99 | -> | Plus |
arm_3R | 12149402..12149574 | 175..347 | 100 | -> | Plus |
arm_3R | 12149648..12150319 | 348..1015 | 99 | == | Plus |