Clone FMO11136 Report

Search the DGRC for FMO11136

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:111
Well:36
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG18607-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11136.5prime Sequence

697 bp (697 high quality bases) assembled on 2011-12-01

> FMO11136.5prime
CAGTCGACATGACTCCCACGACAATAGATGGCGTCACGATACGCATCATG
CGCCCAGAGGATTATGCACAGGTAAAAGCCTATATGGAGGCTGAGTACTA
CACATCGGAGCCTCTGTGCCAGTCCAGCGGCGAACCCGTTCACCAGCAGA
ACGAGGAGATCAACGACGCCTTCAACCAGTCGATAATCGCCGAGGGCACC
AGCCTTTTGGCACTGGATGAAAACGATGGTGGCCGGATTGTGGGTCTAGT
TCTGGCATGTGCCAGTTATCCCGATAATGTGAATGCAGGAACATTGAATT
TGAAGCTCGAGAATGTGGAGGATAACGCTTGGGGTCGAATGTATCATTTA
CTAATGAAGGCCAAGCGCGAAGTCAATCTGTTTGAGCGCTACGACATCCC
GAAGGCGCTCTACTCCCACGTGACCAGCGTGGCCTCGTGGAAGAGGGGCA
AGGGCCTGGGCTCCCGCCTGGCCGCCACCCTGATGGAGCTGGGCCGATCG
AATGGTTTCCCCCTTATGATGGCCTTCTGCACTAGCTTCTACTCCGCTCG
CCAGAAGGGGGCCTTGGGCATGGAGTGCATCTATTCCATCGACTACGCCG
ACTATAAGGACGATGAAGGACGAGTGATCTTCACACCGGCAGCCCCACAC
ACAAAGCTGCGAGTGATGGCATCAAACTGGCAAGCTTTCTAGACCAT

FMO11136.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:06:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG18607-RA 744 CG18607-RA 18..689 9..679 3335 99.9 Plus
CG10659-RA 837 CG10659-RA 390..668 374..652 510 79.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:06:02
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19289126..19289788 9..671 3315 100 Plus
2L 23513712 2L 20025144..20025422 652..374 510 78.9 Minus
Blast to na_te.dros performed on 2014-11-27 00:06:03 has no hits.

FMO11136.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-01 08:57:03 Download gff for FMO11136.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18607-RA 1..675 9..682 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:11:30 Download gff for FMO11136.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18607-RA 9..697 1..687 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:58:54 Download gff for FMO11136.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18607-RA 9..697 1..687 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:58:54 Download gff for FMO11136.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 19289117..19289805 1..687 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:11:30 Download gff for FMO11136.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15176622..15177310 1..687 98   Plus