FMO11136.5prime Sequence
697 bp (697 high quality bases) assembled on 2011-12-01
> FMO11136.5prime
CAGTCGACATGACTCCCACGACAATAGATGGCGTCACGATACGCATCATG
CGCCCAGAGGATTATGCACAGGTAAAAGCCTATATGGAGGCTGAGTACTA
CACATCGGAGCCTCTGTGCCAGTCCAGCGGCGAACCCGTTCACCAGCAGA
ACGAGGAGATCAACGACGCCTTCAACCAGTCGATAATCGCCGAGGGCACC
AGCCTTTTGGCACTGGATGAAAACGATGGTGGCCGGATTGTGGGTCTAGT
TCTGGCATGTGCCAGTTATCCCGATAATGTGAATGCAGGAACATTGAATT
TGAAGCTCGAGAATGTGGAGGATAACGCTTGGGGTCGAATGTATCATTTA
CTAATGAAGGCCAAGCGCGAAGTCAATCTGTTTGAGCGCTACGACATCCC
GAAGGCGCTCTACTCCCACGTGACCAGCGTGGCCTCGTGGAAGAGGGGCA
AGGGCCTGGGCTCCCGCCTGGCCGCCACCCTGATGGAGCTGGGCCGATCG
AATGGTTTCCCCCTTATGATGGCCTTCTGCACTAGCTTCTACTCCGCTCG
CCAGAAGGGGGCCTTGGGCATGGAGTGCATCTATTCCATCGACTACGCCG
ACTATAAGGACGATGAAGGACGAGTGATCTTCACACCGGCAGCCCCACAC
ACAAAGCTGCGAGTGATGGCATCAAACTGGCAAGCTTTCTAGACCAT
FMO11136.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:06:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18607-RA | 744 | CG18607-RA | 18..689 | 9..679 | 3335 | 99.9 | Plus |
CG10659-RA | 837 | CG10659-RA | 390..668 | 374..652 | 510 | 79.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:06:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 19289126..19289788 | 9..671 | 3315 | 100 | Plus |
2L | 23513712 | 2L | 20025144..20025422 | 652..374 | 510 | 78.9 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:06:03 has no hits.
FMO11136.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-01 08:57:03 Download gff for
FMO11136.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18607-RA | 1..675 | 9..682 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:11:30 Download gff for
FMO11136.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18607-RA | 9..697 | 1..687 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:58:54 Download gff for
FMO11136.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18607-RA | 9..697 | 1..687 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:58:54 Download gff for
FMO11136.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 19289117..19289805 | 1..687 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:11:30 Download gff for
FMO11136.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 15176622..15177310 | 1..687 | 98 | | Plus |