FMO11138.5prime Sequence
461 bp (461 high quality bases) assembled on 2011-12-01
> FMO11138.5prime
CAGTCGACATGCGTACCCTTATCCTTGTTACTCTTGTTGCCCTGGTCGCA
GTGGCCTCCGCCCAAGGACCTGGTCCTTGGGGTCCCGGTGGACCTGGTGG
ACCTGGTGGACCAGGTCGTGGTCGCGGAGGACCAGGACGTGGACCTGGCG
GACCAGGTGGCCCAGGAGGTCGCGGACCTGGAGGACCTGGAGGACCAGGA
GGCCCAGGAGGCCCAGGAGGACCAGGAGGACCAGGAGGCCCAGGAGGACC
AGGATGCCCAGGAGGACCAGGTGGACCAGGAGGCCCCAAACCATGGGGAC
CTCCATCCAACCAAACCACATCCACGACAACTGAGGCCTCAACAAGCACT
TCCACCACGACAGCTTCGTCCACTACAGTGTCCTCCACTACAGAGTCCTC
TACGGAATCCTCGACGGAATCATCCACAGCATCCTCCACAGAAGCAAGCT
TTCTAGACCAT
FMO11138.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:08:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
lcs-RA | 590 | CG12794-RA | 33..471 | 5..443 | 2180 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:08:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 21396846..21397284 | 443..5 | 2180 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:08:14 has no hits.
FMO11138.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-01 08:57:13 Download gff for
FMO11138.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lcs-RA | 9..457 | 1..447 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:12:29 Download gff for
FMO11138.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lcs-RA | 9..457 | 1..447 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:59:44 Download gff for
FMO11138.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lcs-RA | 26..474 | 1..447 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:59:44 Download gff for
FMO11138.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 21396842..21397285 | 1..447 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:12:29 Download gff for
FMO11138.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 21267869..21268312 | 1..447 | 98 | | Minus |