FMO11139.5prime Sequence
855 bp (855 high quality bases) assembled on 2011-12-01
> FMO11139.5prime
CAGTCGACATGTTGTTCCGTTCGCAAACCCATGTTTTTCCAGGTGTGTAC
ATGATGGTGGCGATGCTCGTGGTCGCCTTGAGTGGCTACCAGGTGCAGTC
CTATAGCGCCAAGGATATTCTTGCCGATGTCTTGATGACGGATCTGCTGA
ATCGCATGGACAAAGACATGCAGGTGGGCTATTACGACGTGGGCAACGAG
GCAGCCGCTGGCTCCAAGGACAACGTGGACCTGGTCTCCCGGTCGGAGTA
CGCGAGGCTGTGTGACGGCGGAAGCGACTGCATCCTGCAATCGGGCTCGG
CATCGGGAGCTGCCTCCCATCCTTCGCTGCGGGATGACGAGTTTCTGCAG
CACAGTTCGCTGTGGGGTCACCAGTTCATCTCCGGCGGAATGGGAGAGGG
TCCCAACAGGTATCCCACTATAGTGAAGAACGACGCCGGCCTGCCTGCCT
ACTGCAACCCTCCTAATCCCTGCCCTGAGGGCTACGACATGGAGACGCAA
GGCGGCAGCTGCATTGTCGACTTCGAAAACACGGCCATCTTCAGCCGGGA
GTTCCAGGCCGCTCAGGACTGTACCTGCGACAACGAGCATATGTTCGACT
GCTCGGAACAGGATAGTGCTGATGTGGGCGGCGACAAGGGTGACCTGAAC
TCCGCCGTGGAGCAGTACATCATGCAGATGGGCCAGGAGAACAGCCTGAA
CAACGTTAACAGCCTGGCTAAGAAGGCCGGATATCCTGTGATGCCCGATC
CTCGGCTGGACGACGCGGTCATAAACCCGTTCCTCCAGGGCGACCGCTTG
CCCATAGCCGCCAAGAAAGGGCAACCTTTTATTCCACGCAAGCTTTCTAG
ACCAT
FMO11139.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:08:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 7B2-RB | 1148 | CG1168-RB | 153..980 | 9..837 | 4120 | 99.9 | Plus |
| 7B2-RA | 1133 | CG1168-RA | 172..965 | 43..837 | 3950 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:08:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5376999..5377807 | 28..837 | 4000 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:08:23 has no hits.
FMO11139.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-01 08:57:14 Download gff for
FMO11139.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 7B2-RB | 173..1016 | 1..848 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:12:33 Download gff for
FMO11139.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 7B2-RB | 173..1016 | 1..848 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:59:48 Download gff for
FMO11139.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 7B2-RB | 147..990 | 1..848 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:59:48 Download gff for
FMO11139.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5376999..5377817 | 28..848 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:12:33 Download gff for
FMO11139.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1202721..1203539 | 28..848 | 99 | | Plus |
