FMO11144.5prime Sequence
838 bp (838 high quality bases) assembled on 2011-12-01
> FMO11144.5prime
CAGTCGACATGTCATCGGCTATATACCTAGAGAACTATTTAGACGGATTG
GAAAGTCTGCCAACGGAGCTGGAGAGAAATTTTAAGCTGATGCGAAAATT
AGACGATCGAGCACAAACAGCGATGAAGAGCATCGATAGCCATGCCAAGG
ACTTTATGCGCAAGCTGGGCGAGAACGGGGCCATGAGCGAGGATGAGAGG
AGGGAGCGCCAGGAGGATATCAAGGCACTGTTCGGAAAGGCCAAGGAGTA
CAGCGACGACAAGGTGCAGCTGGCCATTCAGACCTACGAACTAGTGGACA
AGCAGATACGGCGACTGGACAACGATTTAGCACGCTTCGAGGGTGAGATT
CAGGAGAAGGCCTCATCCACGCGTGCCAAATCCGAGGAAGTGGTGGCCAA
GAAAGGTCGCAAAAAAACCAAGGACAGCAAGACGACGGGCAAAAAGAAAA
AGTCCGCATCCTCGGATGAGGAAACTGGGCGCGGCAACAACCAATCTAAC
GCCAATTCCAGTGTCAATTCGAGCAGCAATGCCGGGCAAGGTAGCAAAAA
GAAAAAGTCCAAGAAAACCGTCGAGGTTGATGACTCTGAGAAGGAATCGT
GCCACACGGCCGCCACTCATCCCAGCGACGTTATGGACATGCCCGTCGAT
CCCAATGAGCCCACATATTGCCTATGCCACCAGGTGTCCTATGGAGAGAT
GATTGGCTGCGACAATCCCGACTGTCCCATCGAGTGGTTTCACTTCGCTT
GTGTTGGCCTCACCACAAAGCCAAAGGGCAAGTGGTTCTGTCCCAAGTGC
ACGCAGGACAGAAAGAAGAAGCAAGCTTTCTAGACCAT
FMO11144.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:09:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9293-RB | 1002 | CG9293-RB | 100..911 | 9..820 | 4045 | 99.9 | Plus |
CG9293-RA | 1044 | CG9293-RA | 100..654 | 9..563 | 2775 | 100 | Plus |
CG9293-RA | 1044 | CG9293-RA | 694..953 | 561..820 | 1285 | 99.6 | Plus |
Ing3-RA | 2298 | CG6632-RA | 1997..2152 | 647..802 | 225 | 77.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:09:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13386757..13387114 | 402..45 | 1790 | 100 | Minus |
2L | 23513712 | 2L | 13386099..13386259 | 722..562 | 805 | 100 | Minus |
2L | 23513712 | 2L | 13386530..13386690 | 563..403 | 805 | 100 | Minus |
2L | 23513712 | 2L | 13385939..13386036 | 820..723 | 475 | 99 | Minus |
X | 23542271 | X | 18650864..18651019 | 802..647 | 225 | 76.3 | Minus |
2L | 23513712 | 2L | 13387176..13387213 | 46..9 | 190 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:09:12 has no hits.
FMO11144.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-01 08:57:17 Download gff for
FMO11144.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9293-RB | 79..898 | 1..820 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:12:54 Download gff for
FMO11144.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9293-RB | 92..911 | 1..820 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:00:07 Download gff for
FMO11144.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9293-RB | 92..911 | 1..820 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:00:07 Download gff for
FMO11144.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13385939..13386036 | 723..820 | 98 | <- | Minus |
2L | 13386099..13386257 | 564..722 | 100 | <- | Minus |
2L | 13386530..13386690 | 403..563 | 100 | <- | Minus |
2L | 13386757..13387113 | 46..402 | 100 | <- | Minus |
2L | 13387177..13387221 | 1..45 | 91 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:12:54 Download gff for
FMO11144.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 13385939..13386036 | 723..820 | 98 | <- | Minus |
arm_2L | 13386099..13386257 | 564..722 | 100 | <- | Minus |
arm_2L | 13386530..13386690 | 403..563 | 100 | <- | Minus |
arm_2L | 13386757..13387113 | 46..402 | 100 | <- | Minus |
arm_2L | 13387177..13387221 | 1..45 | 91 | | Minus |